Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.37■□□□□ 0.69
Trbv15A0A0A6YYE3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.37■□□□□ 0.69
Trbv15A0A0A6YYE3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv15A0A0A6YYE3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv15A0A0A6YYE3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trbv15A0A0A6YYE3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv15A0A0A6YYE3 Particl-201ENSMUST00000205370 1560 ntBASIC19.36■□□□□ 0.69
Trbv15A0A0A6YYE3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv15A0A0A6YYE3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv15A0A0A6YYE3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trbv15A0A0A6YYE3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv15A0A0A6YYE3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv15A0A0A6YYE3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv15A0A0A6YYE3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.34■□□□□ 0.69
Trbv15A0A0A6YYE3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv15A0A0A6YYE3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv15A0A0A6YYE3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trbv15A0A0A6YYE3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv15A0A0A6YYE3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv15A0A0A6YYE3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv15A0A0A6YYE3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv15A0A0A6YYE3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.32■□□□□ 0.68
Trbv15A0A0A6YYE3 Gm24804-201ENSMUST00000174982 85 ntBASIC19.32■□□□□ 0.68
Trbv15A0A0A6YYE3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv15A0A0A6YYE3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv15A0A0A6YYE3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trbv15A0A0A6YYE3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv15A0A0A6YYE3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv15A0A0A6YYE3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.31■□□□□ 0.68
Trbv15A0A0A6YYE3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trbv15A0A0A6YYE3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.3■□□□□ 0.68
Trbv15A0A0A6YYE3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv15A0A0A6YYE3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv15A0A0A6YYE3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trbv15A0A0A6YYE3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv15A0A0A6YYE3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv15A0A0A6YYE3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv15A0A0A6YYE3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv15A0A0A6YYE3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv15A0A0A6YYE3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv15A0A0A6YYE3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv15A0A0A6YYE3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv15A0A0A6YYE3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv15A0A0A6YYE3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv15A0A0A6YYE3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trbv15A0A0A6YYE3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv15A0A0A6YYE3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv15A0A0A6YYE3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv15A0A0A6YYE3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trbv15A0A0A6YYE3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv15A0A0A6YYE3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv15A0A0A6YYE3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv15A0A0A6YYE3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trbv15A0A0A6YYE3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv15A0A0A6YYE3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trbv15A0A0A6YYE3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv15A0A0A6YYE3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.24■□□□□ 0.67
Trbv15A0A0A6YYE3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv15A0A0A6YYE3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv15A0A0A6YYE3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trbv15A0A0A6YYE3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv15A0A0A6YYE3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv15A0A0A6YYE3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv15A0A0A6YYE3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv15A0A0A6YYE3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv15A0A0A6YYE3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv15A0A0A6YYE3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv15A0A0A6YYE3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv15A0A0A6YYE3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv15A0A0A6YYE3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv15A0A0A6YYE3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv15A0A0A6YYE3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv15A0A0A6YYE3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trbv15A0A0A6YYE3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.21■□□□□ 0.67
Trbv15A0A0A6YYE3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv15A0A0A6YYE3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.21■□□□□ 0.67
Trbv15A0A0A6YYE3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Trbv15A0A0A6YYE3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.2■□□□□ 0.66
Trbv15A0A0A6YYE3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv15A0A0A6YYE3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv15A0A0A6YYE3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv15A0A0A6YYE3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trbv15A0A0A6YYE3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Trbv15A0A0A6YYE3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trbv15A0A0A6YYE3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trbv15A0A0A6YYE3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv15A0A0A6YYE3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv15A0A0A6YYE3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trbv15A0A0A6YYE3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv15A0A0A6YYE3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.16■□□□□ 0.66
Trbv15A0A0A6YYE3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv15A0A0A6YYE3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv15A0A0A6YYE3 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms