Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC096632.1-201ENST00000427395 310 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC097713.2-201ENST00000430199 356 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.84□□□□□ -1.95
HDAC3O15379 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.84□□□□□ -1.95
HDAC3O15379 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.84□□□□□ -1.95
HDAC3O15379 AC092427.1-201ENST00000439177 601 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 RABEPKP1-201ENST00000440529 1026 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.84□□□□□ -1.95
HDAC3O15379 RPL39P6-201ENST00000448289 150 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.84□□□□□ -1.95
HDAC3O15379 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.84□□□□□ -1.95
HDAC3O15379 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.84□□□□□ -1.95
HDAC3O15379 RPS15AP17-201ENST00000470598 390 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.84□□□□□ -1.95
HDAC3O15379 AIG1P1-201ENST00000503376 148 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC093281.2-201ENST00000510153 597 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 RNU6-583P-201ENST00000516012 92 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.84□□□□□ -1.95
HDAC3O15379 AP003385.6-201ENST00000531603 374 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC135279.1-201ENST00000543493 504 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 OR7K1P-201ENST00000546439 926 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC128657.1-201ENST00000549459 145 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.84□□□□□ -1.95
HDAC3O15379 AC024560.3-201ENST00000608482 349 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC084757.4-201ENST00000616350 526 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 AC091953.5-201ENST00000622919 233 ntBASIC2.84□□□□□ -1.95
HDAC3O15379 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HDAC3O15379 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HDAC3O15379 AC130650.2-201ENST00000618736 2403 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AC087359.1-201ENST00000508335 1740 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HDAC3O15379 VTRNA1-1-201ENST00000363120 99 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 RNU6-433P-201ENST00000363216 104 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 SNORA51.6-201ENST00000384151 125 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 RNU6-1122P-201ENST00000384449 107 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 DHFRP6-201ENST00000401776 268 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AL023807.1-201ENST00000407932 359 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 USP9YP33-201ENST00000412220 421 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.83□□□□□ -1.96
HDAC3O15379 MTCYBP38-201ENST00000417160 1123 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.83□□□□□ -1.96
HDAC3O15379 AL353678.1-201ENST00000422735 741 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 MTND4P20-201ENST00000424125 869 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 BX119904.4-201ENST00000424402 301 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.83□□□□□ -1.96
HDAC3O15379 USP9YP35-201ENST00000435696 412 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AL117351.1-201ENST00000438864 766 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 RPL23AP16-201ENST00000441715 421 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.83□□□□□ -1.96
HDAC3O15379 EEF1E1P1-201ENST00000446998 430 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 RPS4XP10-201ENST00000465034 731 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 RPL7P49-201ENST00000471402 708 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HDAC3O15379 TMEM251P1-201ENST00000503717 318 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HDAC3O15379 AC005178.1-201ENST00000508392 440 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.83□□□□□ -1.96
HDAC3O15379 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.83□□□□□ -1.96
HDAC3O15379 DEFB131D-201ENST00000526803 184 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.83□□□□□ -1.96
HDAC3O15379 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.83□□□□□ -1.96
HDAC3O15379 AC008127.2-201ENST00000549925 1075 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.83□□□□□ -1.96
HDAC3O15379 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.83□□□□□ -1.96
HDAC3O15379 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 AC074050.1-201ENST00000563247 211 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.83□□□□□ -1.96
HDAC3O15379 MTCO3P13-201ENST00000577757 781 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 MIR3915-201ENST00000578518 97 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AC138761.3-201ENST00000579993 334 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.83□□□□□ -1.96
HDAC3O15379 AP000811.1-201ENST00000603803 651 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 NUTF2P8-201ENST00000604593 363 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AC068722.2-201ENST00000618734 544 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HDAC3O15379 AC007494.3-201ENST00000624660 743 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HDAC3O15379 FAM35BP-202ENST00000497389 3337 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 OR5BR1P-201ENST00000524992 1330 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HDAC3O15379 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HDAC3O15379 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HDAC3O15379 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 AL390862.1-201ENST00000635467 1469 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 AC026241.1-201ENST00000517873 2142 ntBASIC2.83□□□□□ -1.96
HDAC3O15379 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.83□□□□□ -1.96
HDAC3O15379 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HDAC3O15379 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HDAC3O15379 Y_RNA.560-201ENST00000384689 102 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 FAT1P1-201ENST00000406588 507 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.82□□□□□ -1.96
HDAC3O15379 AL953862.1-201ENST00000423016 168 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AL035410.1-201ENST00000427409 427 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 MTND1P20-201ENST00000430341 950 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms