Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.58□□□□□ -1.52
TMEM88BA6NKF7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 MIR301A-201ENST00000385261 86 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 LAP3P1-201ENST00000403648 294 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 RNU6-1304P-201ENST00000411374 106 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AL356867.1-201ENST00000429623 299 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 TXNP1-201ENST00000441872 371 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 PARP4P3-201ENST00000510265 317 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC026726.1-201ENST00000512859 601 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 RNU6-976P-201ENST00000516086 111 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 RNU6-914P-201ENST00000516749 109 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC022968.1-201ENST00000567372 442 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 RPL23AP87-202ENST00000573039 466 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC005951.2-201ENST00000576282 495 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 MIR3921-201ENST00000577308 85 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 MIR548AC-201ENST00000585049 88 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC012119.1-201ENST00000603184 222 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AP001836.1-201ENST00000604675 523 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 FAM157A-202ENST00000615155 405 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 MIR6128-201ENST00000615528 109 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC098657.3-201ENST00000620434 263 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 AC091953.5-201ENST00000622919 233 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 MTND5P19-201ENST00000424872 1794 ntBASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM88BA6NKF7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 MIR372-201ENST00000362225 67 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 Y_RNA.132-201ENST00000363421 102 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 RNA5SP283-201ENST00000365604 119 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 RNU1-82P-201ENST00000390851 165 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 EI24P1-201ENST00000416584 867 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC110792.1-201ENST00000491826 472 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC096745.1-201ENST00000509945 370 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 SMURF2P1-201ENST00000514992 481 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 Y_RNA.708-201ENST00000516950 96 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC022634.1-201ENST00000520765 532 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 ATP5F1P5-201ENST00000526403 760 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC100830.2-201ENST00000581636 240 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 SNRPGP15-201ENST00000600149 222 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 MIR6839-201ENST00000620425 113 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 AL360181.4-201ENST00000621752 134 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 U3.53-201ENST00000628922 216 ntBASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TMEM88BA6NKF7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 RNU6-328P-201ENST00000390887 106 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 RNU7-138P-201ENST00000459479 64 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC104472.2-201ENST00000469035 601 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 HMGB1P30-201ENST00000492455 606 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AL359273.1-201ENST00000510918 627 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC023442.1-201ENST00000531247 422 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC105129.1-201ENST00000560250 297 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.55□□□□□ -1.52
TMEM88BA6NKF7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms