Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.64□□□□□ -1.99
ITCHQ96J02 RPL39P40-201ENST00000445481 146 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 MRPL50P4-201ENST00000446432 475 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 BX322784.1-201ENST00000455793 1077 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.64□□□□□ -1.99
ITCHQ96J02 AL590639.1-201ENST00000456484 337 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 RPS29P12-201ENST00000460178 152 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 RPL31P50-201ENST00000471002 296 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.64□□□□□ -1.99
ITCHQ96J02 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.64□□□□□ -1.99
ITCHQ96J02 VN1R104P-201ENST00000505115 1009 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.64□□□□□ -1.99
ITCHQ96J02 AC116353.3-201ENST00000511215 249 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.64□□□□□ -1.99
ITCHQ96J02 SNORA70.16-201ENST00000516390 95 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.64□□□□□ -1.99
ITCHQ96J02 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.64□□□□□ -1.99
ITCHQ96J02 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.64□□□□□ -1.99
ITCHQ96J02 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.64□□□□□ -1.99
ITCHQ96J02 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.64□□□□□ -1.99
ITCHQ96J02 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.64□□□□□ -1.99
ITCHQ96J02 CYCSP2-201ENST00000558168 301 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.64□□□□□ -1.99
ITCHQ96J02 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.64□□□□□ -1.99
ITCHQ96J02 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.64□□□□□ -1.99
ITCHQ96J02 GLUD1P4-201ENST00000590914 418 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 BNIP3P39-201ENST00000601077 554 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 DUXAP4-201ENST00000603046 613 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 NUTF2P8-201ENST00000604593 363 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 AC106052.1-201ENST00000608029 497 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 DUXAP10-204ENST00000612052 616 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 AL445264.1-201ENST00000621719 171 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 CR381653.2-201ENST00000624041 768 ntBASIC2.64□□□□□ -1.99
ITCHQ96J02 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
ITCHQ96J02 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ITCHQ96J02 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ITCHQ96J02 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.64□□□□□ -1.99
ITCHQ96J02 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
ITCHQ96J02 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ITCHQ96J02 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
ITCHQ96J02 AC106754.1-201ENST00000562632 1513 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AC091564.4-201ENST00000533934 2194 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ITCHQ96J02 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.63□□□□□ -1.99
ITCHQ96J02 FRG1BP-201ENST00000278882 761 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 RNU6-343P-201ENST00000364709 104 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.63□□□□□ -1.99
ITCHQ96J02 RNU6-636P-201ENST00000384598 107 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 MIR128-1-201ENST00000384921 82 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 MIR592-201ENST00000384959 97 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 MTCO2P8-201ENST00000412213 658 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 CCDC58P2-201ENST00000417131 366 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.63□□□□□ -1.99
ITCHQ96J02 AC106883.1-201ENST00000418805 562 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 ATG3P1-201ENST00000419507 911 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.63□□□□□ -1.99
ITCHQ96J02 AL009048.1-201ENST00000450437 298 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 FAM172BP-201ENST00000487497 1089 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.63□□□□□ -1.99
ITCHQ96J02 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.63□□□□□ -1.99
ITCHQ96J02 AC091826.1-201ENST00000514065 313 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.63□□□□□ -1.99
ITCHQ96J02 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.63□□□□□ -1.99
ITCHQ96J02 AC103783.1-201ENST00000520506 373 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.63□□□□□ -1.99
ITCHQ96J02 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.63□□□□□ -1.99
ITCHQ96J02 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ITCHQ96J02 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.63□□□□□ -1.99
ITCHQ96J02 HSPE1P7-201ENST00000604681 321 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AC008277.2-201ENST00000605196 797 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AP002826.1-201ENST00000608835 315 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AL590099.1-201ENST00000615276 138 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 AL138880.2-201ENST00000616214 239 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 SCARNA15.3-201ENST00000626315 122 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 SCARNA4.1-201ENST00000628597 123 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
ITCHQ96J02 AC092447.7-201ENST00000422212 1621 ntBASIC2.63□□□□□ -1.99
ITCHQ96J02 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ITCHQ96J02 Y_RNA.234-201ENST00000364409 97 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 RNU6-906P-201ENST00000384700 70 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ITCHQ96J02 RPS3AP24-201ENST00000407896 734 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 AL953862.1-201ENST00000423016 168 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.62□□□□□ -1.99
ITCHQ96J02 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.62□□□□□ -1.99
ITCHQ96J02 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.62□□□□□ -1.99
ITCHQ96J02 THAP5P1-201ENST00000439089 262 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.62□□□□□ -1.99
ITCHQ96J02 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.62□□□□□ -1.99
ITCHQ96J02 AC002381.1-201ENST00000447049 280 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.62□□□□□ -1.99
ITCHQ96J02 snoU13.8-201ENST00000458890 104 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 AC022483.1-201ENST00000514020 567 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 RNU6-150P-201ENST00000516237 95 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 SCARNA1-201ENST00000517138 166 ntBASIC2.62□□□□□ -1.99
ITCHQ96J02 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.62□□□□□ -1.99
ITCHQ96J02 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.62□□□□□ -1.99
ITCHQ96J02 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.62□□□□□ -1.99
ITCHQ96J02 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms