Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC012409.4-201ENST00000612923 249 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 AC004696.1-201ENST00000614345 607 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.72□□□□□ -1.65
EPHB3P54753 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
EPHB3P54753 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.72□□□□□ -1.65
EPHB3P54753 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
EPHB3P54753 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
EPHB3P54753 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
EPHB3P54753 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.71□□□□□ -1.65
EPHB3P54753 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
EPHB3P54753 AC083843.3-201ENST00000623679 2186 ntBASIC4.71□□□□□ -1.65
EPHB3P54753 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
EPHB3P54753 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
EPHB3P54753 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
EPHB3P54753 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
EPHB3P54753 API5P2-201ENST00000397055 1498 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.71□□□□□ -1.66
EPHB3P54753 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
EPHB3P54753 Y_RNA.80-201ENST00000362996 102 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 RNU1-130P-201ENST00000363930 160 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 RNU6-82P-201ENST00000363970 107 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 Y_RNA.364-201ENST00000365532 101 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
EPHB3P54753 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
EPHB3P54753 DSTNP4-201ENST00000399472 474 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 MIR548I3-201ENST00000408378 149 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 MIR548I1-201ENST00000408810 149 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.71□□□□□ -1.66
EPHB3P54753 AC093151.1-201ENST00000427711 313 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AC004975.1-201ENST00000428733 208 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AL590233.1-201ENST00000430017 456 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.71□□□□□ -1.66
EPHB3P54753 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.71□□□□□ -1.66
EPHB3P54753 HMGB1P12-201ENST00000438594 598 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
EPHB3P54753 NUTF2P3-201ENST00000448540 384 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 RPL12P25-201ENST00000455592 494 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 CEACAMP4-201ENST00000457676 421 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 SNRPFP3-201ENST00000457792 225 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AC128713.1-201ENST00000471495 306 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.71□□□□□ -1.66
EPHB3P54753 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.71□□□□□ -1.66
EPHB3P54753 OR4P1P-201ENST00000530808 1136 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.71□□□□□ -1.66
EPHB3P54753 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
EPHB3P54753 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.71□□□□□ -1.66
EPHB3P54753 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.71□□□□□ -1.66
EPHB3P54753 BPIFA4P-203ENST00000603168 689 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.71□□□□□ -1.66
EPHB3P54753 Z82243.1-201ENST00000609432 473 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 AC007485.1-201ENST00000616755 206 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
EPHB3P54753 PNPT1P2-201ENST00000456768 2050 ntBASIC4.71□□□□□ -1.66
EPHB3P54753 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.71□□□□□ -1.66
EPHB3P54753 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
EPHB3P54753 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
EPHB3P54753 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
EPHB3P54753 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
EPHB3P54753 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EPHB3P54753 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 RNA5SP258-201ENST00000362750 119 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 Y_RNA.257-201ENST00000364596 102 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 RNU6-601P-201ENST00000384540 107 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 UBE2V1P2-201ENST00000397758 440 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 Y_RNA.646-201ENST00000410980 101 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.7□□□□□ -1.66
EPHB3P54753 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.7□□□□□ -1.66
EPHB3P54753 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 FTH1P1-201ENST00000437933 532 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.7□□□□□ -1.66
EPHB3P54753 RPL21P89-201ENST00000444021 467 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 AC021382.1-201ENST00000483523 359 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AC015911.1-201ENST00000495111 156 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EPHB3P54753 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
EPHB3P54753 HMGB3P16-201ENST00000508037 287 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AC097473.1-201ENST00000508142 408 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 PARP4P3-201ENST00000510265 317 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.7□□□□□ -1.66
EPHB3P54753 RNA5SP497-201ENST00000516081 97 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 Y_RNA.668-201ENST00000516233 93 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 SNORA31.9-201ENST00000516429 84 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.7□□□□□ -1.66
EPHB3P54753 AP000763.2-201ENST00000540641 163 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.7□□□□□ -1.66
EPHB3P54753 AC104662.1-201ENST00000604448 511 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AL008729.2-201ENST00000606393 473 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.7□□□□□ -1.66
EPHB3P54753 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.7□□□□□ -1.66
EPHB3P54753 AC245517.5-201ENST00000611529 162 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 uc_338.13-201ENST00000618243 179 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AL596245.1-201ENST00000618994 362 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 PLCE1P1-201ENST00000622094 305 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 AL669831.3-213ENST00000636676 183 ntBASIC4.7□□□□□ -1.66
EPHB3P54753 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms