Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC008739.3-201ENST00000603262 127 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.9□□□□□ -1.95
HDAC3O15379 AC064807.4-201ENST00000607201 407 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.9□□□□□ -1.95
HDAC3O15379 AC107871.2-201ENST00000612894 502 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 MIR6075-201ENST00000620782 95 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC010338.1-201ENST00000621823 717 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC018692.3-201ENST00000623929 123 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.9□□□□□ -1.95
HDAC3O15379 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HDAC3O15379 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HDAC3O15379 AL513185.3-201ENST00000433335 1300 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 CDR1-202ENST00000625883 1485 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
HDAC3O15379 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDAC3O15379 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HDAC3O15379 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.89□□□□□ -1.95
HDAC3O15379 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDAC3O15379 SNRPEP3-201ENST00000338402 276 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 Y_RNA.25-201ENST00000362528 102 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RNU6-216P-201ENST00000363282 104 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RNU6-931P-201ENST00000363850 107 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RNU6-1243P-201ENST00000364028 107 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AL590004.2-201ENST00000404787 371 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 U3.42-201ENST00000408746 214 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RNU2-28P-201ENST00000410457 189 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RNU4-47P-201ENST00000410876 114 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 PIGPP2-201ENST00000411569 458 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 BX682237.1-201ENST00000415016 335 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 MTCO3P12-201ENST00000416718 547 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RPS3AP9-201ENST00000417027 792 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC016907.1-201ENST00000419483 435 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 UBE2V1P1-201ENST00000430836 445 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HDAC3O15379 AC091862.1-201ENST00000438016 1100 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 RPL39P40-201ENST00000445481 146 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RPL18AP17-201ENST00000455326 198 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 RPL23AP11-201ENST00000475260 469 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC013828.1-201ENST00000481845 158 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDAC3O15379 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 RNA5SP76-201ENST00000516277 87 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 ARL2BPP5-201ENST00000523141 481 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 MTCO1P47-201ENST00000523889 1271 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.89□□□□□ -1.95
HDAC3O15379 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDAC3O15379 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
HDAC3O15379 AL391156.1-201ENST00000554965 554 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 NCAPGP2-201ENST00000557911 754 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.89□□□□□ -1.95
HDAC3O15379 PIGPP4-201ENST00000584447 307 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 MIR4999-201ENST00000585029 91 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC106791.2-201ENST00000604680 391 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC121247.2-201ENST00000604776 136 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC018714.1-201ENST00000605028 208 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AC069304.2-201ENST00000605154 435 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 AL592221.1-201ENST00000605266 382 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 AC245297.2-201ENST00000610119 565 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 AC092650.2-201ENST00000619984 902 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 AC244100.1-202ENST00000621554 382 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 MIR6733-201ENST00000635723 61 ntBASIC2.89□□□□□ -1.95
HDAC3O15379 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDAC3O15379 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.89□□□□□ -1.95
HDAC3O15379 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HDAC3O15379 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HDAC3O15379 GABRG2-229ENST00000641017 3628 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 RPL9P7-201ENST00000330965 580 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 RNU1-35P-201ENST00000362782 153 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 SNORA4.1-201ENST00000364263 144 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 RNU6-1226P-201ENST00000384317 107 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 MIR649-201ENST00000384843 97 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 FO393413.1-201ENST00000402892 195 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 RNA5SP38-201ENST00000410750 119 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 RNU2-25P-201ENST00000411041 191 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
HDAC3O15379 RPS7P15-201ENST00000415804 584 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.88□□□□□ -1.95
HDAC3O15379 AL022400.1-201ENST00000423946 935 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 AL354941.1-201ENST00000438600 464 ntBASIC2.88□□□□□ -1.95
HDAC3O15379 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.88□□□□□ -1.95
HDAC3O15379 AL591503.2-201ENST00000442314 1005 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms