Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC011445.2-201ENST00000599274 173 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.31□□□□□ -1.56
NFKB1P19838 AC012119.1-201ENST00000603184 222 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 SDR42E1P2-201ENST00000614861 481 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 AC118658.2-201ENST00000618697 459 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 SDR42E1P4-201ENST00000620894 481 ntBASIC5.31□□□□□ -1.56
NFKB1P19838 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.31□□□□□ -1.56
NFKB1P19838 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.31□□□□□ -1.56
NFKB1P19838 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.31□□□□□ -1.56
NFKB1P19838 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
NFKB1P19838 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NFKB1P19838 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NFKB1P19838 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NFKB1P19838 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NFKB1P19838 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 MTND5P6-201ENST00000422338 1798 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 PABPC1P7-201ENST00000413177 1513 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 U3.2-201ENST00000362981 210 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 U3.3-201ENST00000362986 216 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 RN7SKP162-201ENST00000363605 345 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 RNU6-806P-201ENST00000365147 105 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 RNU1-74P-201ENST00000384108 171 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 Y_RNA.480-201ENST00000384364 102 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 RNU6-174P-201ENST00000410406 106 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.3□□□□□ -1.56
NFKB1P19838 EI24P4-201ENST00000423683 1078 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AC108075.1-201ENST00000424692 529 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AL353997.1-201ENST00000432936 108 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.3□□□□□ -1.56
NFKB1P19838 CYCSP43-201ENST00000438233 310 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 PTMAP6-201ENST00000439110 327 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.3□□□□□ -1.56
NFKB1P19838 AL392103.1-201ENST00000447000 198 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AL031274.1-201ENST00000450334 232 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 RPL31P60-201ENST00000478450 367 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 BX510359.5-201ENST00000515651 304 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 RNU6-677P-201ENST00000516914 101 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 FTH1P11-201ENST00000517577 551 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.3□□□□□ -1.56
NFKB1P19838 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.3□□□□□ -1.56
NFKB1P19838 AC009643.1-201ENST00000532030 391 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.3□□□□□ -1.56
NFKB1P19838 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.3□□□□□ -1.56
NFKB1P19838 RN7SL753P-201ENST00000581238 290 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 HMGB2P1-201ENST00000591146 634 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AL031176.1-201ENST00000604554 466 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 AC007619.2-201ENST00000605743 379 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 MIR6862-1-201ENST00000613016 70 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 MIR6862-2-201ENST00000614755 70 ntBASIC5.3□□□□□ -1.56
NFKB1P19838 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.3□□□□□ -1.56
NFKB1P19838 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NFKB1P19838 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NFKB1P19838 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NFKB1P19838 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NFKB1P19838 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NFKB1P19838 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NFKB1P19838 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.29□□□□□ -1.56
NFKB1P19838 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NFKB1P19838 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NFKB1P19838 AC027287.1-201ENST00000553115 1453 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 RNU6-770P-201ENST00000363929 105 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 COX5BP7-201ENST00000414780 274 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC099336.2-201ENST00000422457 254 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.29□□□□□ -1.56
NFKB1P19838 AL160275.3-201ENST00000423876 471 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 PIGPP3-201ENST00000425307 415 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC093655.2-201ENST00000425735 631 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 RPS29P10-201ENST00000439197 166 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 NEFMP1-201ENST00000443423 1006 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 PCMTD1P1-201ENST00000455560 355 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC099560.2-201ENST00000457554 255 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.29□□□□□ -1.56
NFKB1P19838 RPS4XP20-201ENST00000505751 772 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.29□□□□□ -1.56
NFKB1P19838 Y_RNA.700-201ENST00000516806 100 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 SNORA40.15-201ENST00000516884 107 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 RNU6-352P-201ENST00000516908 107 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 RNU7-4P-201ENST00000516961 62 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 RNU6-111P-201ENST00000517179 105 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC103783.1-201ENST00000520506 373 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.29□□□□□ -1.56
NFKB1P19838 ERHP1-201ENST00000523006 310 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AC022080.3-201ENST00000544433 482 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
NFKB1P19838 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.29□□□□□ -1.56
NFKB1P19838 AC006600.1-201ENST00000572529 153 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.29□□□□□ -1.56
NFKB1P19838 AC104763.2-201ENST00000604179 382 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 AL161616.1-201ENST00000611867 286 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 MIR6837-201ENST00000620884 64 ntBASIC5.29□□□□□ -1.56
NFKB1P19838 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NFKB1P19838 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NFKB1P19838 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms