Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 MIR8080-201ENST00000622224 89 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.49
PCDHB9Q9Y5E1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB9Q9Y5E1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB9Q9Y5E1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PCDHB9Q9Y5E1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 Y_RNA.180-201ENST00000363867 113 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 RNU6-933P-201ENST00000384424 107 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AL645927.1-201ENST00000396783 406 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AL513475.1-201ENST00000406602 315 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 RPL7AP73-201ENST00000413490 353 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AC063979.1-201ENST00000415539 377 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AC113412.1-201ENST00000425840 504 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AL139148.1-201ENST00000427122 680 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AL590399.2-201ENST00000427536 309 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AL390119.1-201ENST00000440329 312 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 CYCSP51-201ENST00000443545 318 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AC090804.1-201ENST00000448870 490 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 SNORA81.3-201ENST00000517283 198 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 HMGN2P6-201ENST00000551091 273 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AC060780.2-201ENST00000589047 198 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AL158827.2-201ENST00000602494 330 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 AL691447.3-201ENST00000635020 330 ntBASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB9Q9Y5E1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 MAPK10-338ENST00000641647 3362 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 Y_RNA.105-201ENST00000363182 111 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 Y_RNA.183-201ENST00000363882 113 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 Y_RNA.324-201ENST00000365165 102 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 RNA5SP131-201ENST00000365452 119 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 U3.42-201ENST00000408746 214 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 RNU6-712P-201ENST00000410558 100 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 PRELID3BP1-201ENST00000457142 540 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 RN7SL51P-201ENST00000468230 285 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 HMGN2P13-201ENST00000476476 274 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AC012158.1-204ENST00000483430 465 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AC008958.1-201ENST00000511047 682 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AC008716.1-201ENST00000511084 513 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 RN7SKP234-201ENST00000517173 224 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 SNORA31.22-201ENST00000517204 135 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 MIR5701-3-201ENST00000578890 82 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 MIR5701-1-201ENST00000585138 82 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 MIR5701-2-201ENST00000615634 82 ntBASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB9Q9Y5E1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 AC007938.2-201ENST00000604666 2634 ntBASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB9Q9Y5E1 RNU6-249P-201ENST00000363016 102 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 1089.7 ms