Protein–RNA interactions for Protein: A0A087X0R7

SENP3-EIF4A1, SENP3-EIF4A1 readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1A0A087X0R7 PTMAP2-201ENST00000397627 327 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 OR6C66P-201ENST00000414917 930 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 SKA2P1-201ENST00000425592 390 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AP1S2P1-201ENST00000457344 379 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 TRBVA-201ENST00000498804 316 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC079140.5-201ENST00000507882 310 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC116655.1-201ENST00000508324 901 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 MYL12AP1-201ENST00000518490 515 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC090751.1-201ENST00000566966 267 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC022726.1-201ENST00000587475 207 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC104695.3-201ENST00000604052 296 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC012468.1-201ENST00000604888 430 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC011890.2-201ENST00000613393 294 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC005592.1-201ENST00000566527 1640 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AL158163.1-201ENST00000603915 1649 ntBASIC6.35□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 DHX40P1-201ENST00000588725 1412 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AL442128.2-201ENST00000620246 1824 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 RNU6-552P-201ENST00000362869 119 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 Y_RNA.152-201ENST00000363578 100 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 RNY4P16-201ENST00000364768 94 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 Y_RNA.350-201ENST00000365409 98 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 RNU6-744P-201ENST00000365557 107 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 Y_RNA.396-201ENST00000383949 103 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 RNU6-1316P-201ENST00000384242 108 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 MIR454-201ENST00000390180 115 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 HMGB3P7-201ENST00000400214 611 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AL592291.1-201ENST00000403830 352 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 PRELID3BP11-201ENST00000414230 479 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 CKS1BP6-201ENST00000424932 240 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 RPL23AP1-201ENST00000428990 471 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 OR4K11P-201ENST00000431829 904 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC092162.1-201ENST00000432828 434 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 RPS17P8-201ENST00000434525 335 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC004938.1-201ENST00000438468 308 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AL138799.3-201ENST00000438968 350 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 MTCO3P45-201ENST00000443036 613 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 HSFY6P-201ENST00000445573 403 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 PHBP16-201ENST00000446318 950 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 GZMAP1-201ENST00000503054 631 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 TMEM251P1-201ENST00000503717 318 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 OR4K8P-201ENST00000578842 1048 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 MIR3200-201ENST00000580767 85 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC110743.1-201ENST00000584870 478 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC105224.1-201ENST00000587055 421 ntBASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.34□□□□□ -1.39
SENP3-EIF4A1A0A087X0R7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.34□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC121333.1-201ENST00000567488 2709 ntBASIC6.34□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC119744.1-201ENST00000454746 1715 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AP000756.2-201ENST00000624168 2567 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 RNU6-266P-201ENST00000364225 107 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 RNU6-593P-201ENST00000364716 112 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 RNU6-903P-201ENST00000391270 109 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AL590290.1-201ENST00000405336 380 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 RNU6-101P-201ENST00000410323 104 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 ATG3P1-201ENST00000419507 911 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 RPL7AP25-201ENST00000423357 805 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 RPL7L1P10-201ENST00000427790 463 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC002381.1-201ENST00000447049 280 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC079168.2-201ENST00000453977 416 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 CYCSP34-201ENST00000458172 304 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 RPL23AP41-201ENST00000484754 458 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC073073.1-201ENST00000493920 463 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC018797.3-201ENST00000513388 1241 ntBASIC6.33□□□□□ -1.4
SENP3-EIF4A1A0A087X0R7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms