Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RN7SL432P-201ENST00000484057 298 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 PPIAP19-201ENST00000486414 492 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 PGAM1P13-201ENST00000507497 754 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 SNORA70.11-201ENST00000515987 138 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 SNORA70.13-201ENST00000516116 138 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 Y_RNA.680-201ENST00000516441 93 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 SCARNA16.4-201ENST00000516956 187 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.51□□□□□ -1.53
NFKB1P19838 AC005899.2-201ENST00000584353 90 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.51□□□□□ -1.53
NFKB1P19838 AC025588.3-201ENST00000604182 274 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 Z98751.3-201ENST00000604447 521 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 AC244107.2-201ENST00000611773 76 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 AL161637.1-201ENST00000622380 412 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NFKB1P19838 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 AC010266.2-201ENST00000564741 3255 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.51□□□□□ -1.53
NFKB1P19838 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NFKB1P19838 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 AC009951.1-201ENST00000623674 2614 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NFKB1P19838 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.5□□□□□ -1.53
NFKB1P19838 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.5□□□□□ -1.53
NFKB1P19838 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NFKB1P19838 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NFKB1P19838 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NFKB1P19838 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NFKB1P19838 SAGE4P-201ENST00000442271 3381 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 Y_RNA.350-201ENST00000365409 98 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 RNU6-393P-201ENST00000384475 107 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 RNU6-306P-201ENST00000384617 107 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 SNORA41-201ENST00000384675 132 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AL109755.1-201ENST00000401791 649 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 RN7SKP159-201ENST00000410657 292 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.5□□□□□ -1.53
NFKB1P19838 RPL21P109-201ENST00000422213 475 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.5□□□□□ -1.53
NFKB1P19838 HMGB1P9-201ENST00000429856 646 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 USP9YP30-201ENST00000430729 455 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NFKB1P19838 FTLP19-201ENST00000433300 394 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 MRPS18BP2-201ENST00000434310 759 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.5□□□□□ -1.53
NFKB1P19838 GSTM5P1-201ENST00000434751 660 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 FHP1-201ENST00000442741 703 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 RPS23P3-201ENST00000470993 430 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 FTH1P24-201ENST00000503502 462 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AC010350.1-201ENST00000504908 231 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.5□□□□□ -1.53
NFKB1P19838 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.5□□□□□ -1.53
NFKB1P19838 RNU2-69P-201ENST00000516061 100 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 RNU6-406P-201ENST00000516470 107 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 RNU6-323P-201ENST00000521915 107 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AC100870.1-201ENST00000522035 505 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.5□□□□□ -1.53
NFKB1P19838 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.5□□□□□ -1.53
NFKB1P19838 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.5□□□□□ -1.53
NFKB1P19838 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.5□□□□□ -1.53
NFKB1P19838 AP004607.2-201ENST00000533949 322 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.5□□□□□ -1.53
NFKB1P19838 AC091516.1-201ENST00000549191 703 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.5□□□□□ -1.53
NFKB1P19838 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.5□□□□□ -1.53
NFKB1P19838 AC015720.2-201ENST00000567709 334 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AC104695.2-201ENST00000605056 775 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 EIF3FP1-201ENST00000613970 806 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AL355810.1-201ENST00000614629 552 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 AC015967.1-201ENST00000619893 476 ntBASIC5.5□□□□□ -1.53
NFKB1P19838 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.5□□□□□ -1.53
NFKB1P19838 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.5□□□□□ -1.53
NFKB1P19838 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NFKB1P19838 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
NFKB1P19838 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NFKB1P19838 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.5□□□□□ -1.53
NFKB1P19838 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.5□□□□□ -1.53
NFKB1P19838 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 AP001029.2-203ENST00000589795 4910 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NFKB1P19838 AC026523.2-201ENST00000625039 7739 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.49□□□□□ -1.53
NFKB1P19838 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
NFKB1P19838 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.49□□□□□ -1.53
NFKB1P19838 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NFKB1P19838 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NFKB1P19838 Y_RNA.461-201ENST00000384263 103 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 RPL21P1-201ENST00000399532 476 ntBASIC5.49□□□□□ -1.53
NFKB1P19838 MIR1252-201ENST00000408861 65 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms