Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 LUZP4P1-201ENST00000415420 344 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 TRGV6-201ENST00000417928 299 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 RPS24P8-201ENST00000431490 402 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 USP9YP34-201ENST00000453983 808 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 RN7SL283P-201ENST00000489055 303 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AC103710.1-201ENST00000610003 901 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 BX664608.1-201ENST00000610519 487 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 AC106730.3-201ENST00000624568 641 ntBASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHANK3Q9BYB0 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 MTCYBP7-201ENST00000419540 1134 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 CALM1P2-201ENST00000452941 448 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 CLIC4P1-201ENST00000453177 535 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 SNRPGP18-201ENST00000553000 214 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC068446.3-201ENST00000555285 382 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC135628.1-201ENST00000568867 534 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AL356266.1-201ENST00000623311 483 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 RPS27P27-201ENST00000498779 255 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 TRAV31-201ENST00000502780 342 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC025281.1-201ENST00000567026 265 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AP005136.1-201ENST00000579765 429 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC116447.1-201ENST00000613153 453 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 OR1S1-201ENST00000624470 978 ntBASIC2.93□□□□□ -1.94
SHANK3Q9BYB0 AC008432.1-201ENST00000615912 1320 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 AL592437.2-201ENST00000421655 2434 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 AC092427.1-202ENST00000430569 476 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 RPS15AP28-201ENST00000435088 386 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 NDUFB4P6-201ENST00000436819 366 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 AC108120.2-201ENST00000512973 294 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 MTND5P29-201ENST00000458676 1807 ntBASIC2.92□□□□□ -1.94
SHANK3Q9BYB0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 RNY1P14-201ENST00000384426 108 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 MT-TP-201ENST00000387461 68 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 ELOCP10-201ENST00000440624 327 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 IFNWP4-201ENST00000453148 294 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AP003467.2-201ENST00000520175 319 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 ELOCP31-201ENST00000540463 467 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 EIF1AXP2-201ENST00000555940 413 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 ELOCP34-201ENST00000604436 327 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 RMST_5.1-201ENST00000618704 126 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 AC009831.4-201ENST00000620744 325 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 RPL23AP61-201ENST00000623642 466 ntBASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
SHANK3Q9BYB0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 MTCYBP12-201ENST00000440559 1134 ntBASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 AC104629.2-201ENST00000468627 598 ntBASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 AC072039.1-201ENST00000477611 581 ntBASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 AC021087.2-201ENST00000504656 1203 ntBASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.9□□□□□ -1.94
SHANK3Q9BYB0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms