RNA–Protein interactions for RNA: ENST00000527562.1

AC007876.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC007876.1, Length 983 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007876.1-201ENST00000527562 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
AC007876.1-201ENST00000527562 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
AC007876.1-201ENST00000527562 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
AC007876.1-201ENST00000527562 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
AC007876.1-201ENST00000527562 FOXD1Q16676 465 aa22.41■■□□□ 1.18
AC007876.1-201ENST00000527562 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
AC007876.1-201ENST00000527562 PPP6R1Q9UPN7 881 aa21■□□□□ 0.95
AC007876.1-201ENST00000527562 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
AC007876.1-201ENST00000527562 ADRA2BP18089 450 aa20.93■□□□□ 0.94
AC007876.1-201ENST00000527562 MSH5O43196 834 aa20.91■□□□□ 0.94
AC007876.1-201ENST00000527562 POTEDQ86YR6 584 aa20.41■□□□□ 0.86
AC007876.1-201ENST00000527562 MAPK8IP2Q13387 824 aaPredicted RBP19.23■□□□□ 0.67
AC007876.1-201ENST00000527562 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
AC007876.1-201ENST00000527562 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
AC007876.1-201ENST00000527562 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
AC007876.1-201ENST00000527562 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
AC007876.1-201ENST00000527562 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
AC007876.1-201ENST00000527562 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
AC007876.1-201ENST00000527562 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
AC007876.1-201ENST00000527562 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
AC007876.1-201ENST00000527562 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
AC007876.1-201ENST00000527562 RNF39Q9H2S5 420 aa17.88■□□□□ 0.45
AC007876.1-201ENST00000527562 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
AC007876.1-201ENST00000527562 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
AC007876.1-201ENST00000527562 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
AC007876.1-201ENST00000527562 KCNA4P22459 653 aa17.52■□□□□ 0.4
AC007876.1-201ENST00000527562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
AC007876.1-201ENST00000527562 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
AC007876.1-201ENST00000527562 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
AC007876.1-201ENST00000527562 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
AC007876.1-201ENST00000527562 CAPN15O75808 1086 aa16.87■□□□□ 0.29
AC007876.1-201ENST00000527562 DSG3P32926 999 aa16.76■□□□□ 0.27
AC007876.1-201ENST00000527562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
AC007876.1-201ENST00000527562 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
AC007876.1-201ENST00000527562 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
AC007876.1-201ENST00000527562 APLP2Q06481 763 aa16.61■□□□□ 0.25
AC007876.1-201ENST00000527562 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
AC007876.1-201ENST00000527562 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
AC007876.1-201ENST00000527562 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
AC007876.1-201ENST00000527562 ABCB7O75027 752 aa16.5■□□□□ 0.23
AC007876.1-201ENST00000527562 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
AC007876.1-201ENST00000527562 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
AC007876.1-201ENST00000527562 POLA2Q14181 598 aa16.16■□□□□ 0.18
AC007876.1-201ENST00000527562 ZBTB22O15209 634 aa16.13■□□□□ 0.17
AC007876.1-201ENST00000527562 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
AC007876.1-201ENST00000527562 POTEHQ6S545 545 aa15.99■□□□□ 0.15
AC007876.1-201ENST00000527562 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
AC007876.1-201ENST00000527562 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
AC007876.1-201ENST00000527562 ATXN8OSP0DMR3 200 aa15.77■□□□□ 0.12
AC007876.1-201ENST00000527562 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
AC007876.1-201ENST00000527562 CHRDL2Q6WN34 429 aa15.62■□□□□ 0.09
AC007876.1-201ENST00000527562 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
AC007876.1-201ENST00000527562 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
AC007876.1-201ENST00000527562 FBLN2P98095 1184 aa15.44■□□□□ 0.06
AC007876.1-201ENST00000527562 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
AC007876.1-201ENST00000527562 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
AC007876.1-201ENST00000527562 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
AC007876.1-201ENST00000527562 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
AC007876.1-201ENST00000527562 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
AC007876.1-201ENST00000527562 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
AC007876.1-201ENST00000527562 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
AC007876.1-201ENST00000527562 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
AC007876.1-201ENST00000527562 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
AC007876.1-201ENST00000527562 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
AC007876.1-201ENST00000527562 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
AC007876.1-201ENST00000527562 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
AC007876.1-201ENST00000527562 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
AC007876.1-201ENST00000527562 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
AC007876.1-201ENST00000527562 HAX1O00165 279 aa14.98□□□□□ -0.01
AC007876.1-201ENST00000527562 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
AC007876.1-201ENST00000527562 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
AC007876.1-201ENST00000527562 EVX2Q03828 476 aa14.83□□□□□ -0.04
AC007876.1-201ENST00000527562 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
AC007876.1-201ENST00000527562 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
AC007876.1-201ENST00000527562 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
AC007876.1-201ENST00000527562 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
AC007876.1-201ENST00000527562 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
AC007876.1-201ENST00000527562 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
AC007876.1-201ENST00000527562 GABBR2O75899 941 aa14.47□□□□□ -0.09
AC007876.1-201ENST00000527562 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
AC007876.1-201ENST00000527562 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
AC007876.1-201ENST00000527562 PROM2Q8N271 834 aa14.29□□□□□ -0.12
AC007876.1-201ENST00000527562 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
AC007876.1-201ENST00000527562 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
AC007876.1-201ENST00000527562 ZNF579Q8NAF0 562 aaKnown RBP14.21□□□□□ -0.13
AC007876.1-201ENST00000527562 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
AC007876.1-201ENST00000527562 CLCN6P51797 869 aa14.18□□□□□ -0.14
AC007876.1-201ENST00000527562 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
AC007876.1-201ENST00000527562 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
AC007876.1-201ENST00000527562 PHF12Q96QT6 1004 aa14.08□□□□□ -0.16
AC007876.1-201ENST00000527562 GALR2O43603 387 aaPredicted RBP14.07□□□□□ -0.16
AC007876.1-201ENST00000527562 LHX8Q68G74 356 aa14.07□□□□□ -0.16
AC007876.1-201ENST00000527562 DCBLD2Q96PD2 775 aa14.07□□□□□ -0.16
AC007876.1-201ENST00000527562 FKBP8Q14318 412 aa13.96□□□□□ -0.17
AC007876.1-201ENST00000527562 MIER1Q8N108 512 aa13.96□□□□□ -0.17
AC007876.1-201ENST00000527562 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
AC007876.1-201ENST00000527562 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
AC007876.1-201ENST00000527562 MS4A3Q96HJ5 214 aa13.88□□□□□ -0.19
AC007876.1-201ENST00000527562 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
AC007876.1-201ENST00000527562 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms