Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC140479.3-201ENST00000418944 1126 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 RPL18P10-201ENST00000425606 538 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 MTCYBP9-201ENST00000431021 303 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 ERLEC1P1-201ENST00000433806 578 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.98□□□□□ -1.61
EPHB3P54753 AC079781.2-201ENST00000446424 169 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 VN1R17P-201ENST00000472048 1090 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 AC005912.1-201ENST00000495392 255 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 AC114797.1-201ENST00000514003 728 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 RNU6-513P-201ENST00000516104 104 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.98□□□□□ -1.61
EPHB3P54753 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 AC063950.1-201ENST00000552036 308 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 AC093249.4-201ENST00000564755 259 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.98□□□□□ -1.61
EPHB3P54753 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.98□□□□□ -1.61
EPHB3P54753 AL731566.2-201ENST00000618971 317 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 BX005214.3-202ENST00000619809 325 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.98□□□□□ -1.61
EPHB3P54753 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
EPHB3P54753 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EPHB3P54753 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
EPHB3P54753 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EPHB3P54753 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
EPHB3P54753 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
EPHB3P54753 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EPHB3P54753 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.97□□□□□ -1.61
EPHB3P54753 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 CASC19-204ENST00000641001 2055 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 Y_RNA.31-201ENST00000362574 102 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 SNORA71.2-201ENST00000364941 134 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 RNU6-744P-201ENST00000365557 107 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 RNU6-1316P-201ENST00000384242 108 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 RNU6-784P-201ENST00000384330 106 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 Z98745.1-201ENST00000402553 494 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 RNU6-193P-201ENST00000410977 107 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC007738.1-201ENST00000413892 348 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.97□□□□□ -1.61
EPHB3P54753 RPL23AP1-201ENST00000428990 471 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC119618.1-201ENST00000434191 222 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 RPS3AP52-201ENST00000435639 297 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AL731563.1-201ENST00000442202 214 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.97□□□□□ -1.61
EPHB3P54753 AC002381.1-201ENST00000447049 280 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC073415.1-201ENST00000449240 153 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC079168.2-201ENST00000453977 416 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 RNU6-1218P-201ENST00000458990 108 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 Y_RNA.635-201ENST00000459041 101 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 RN7SL385P-201ENST00000468873 276 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC104563.1-201ENST00000476147 376 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AL135752.1-201ENST00000479477 471 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC093267.1-201ENST00000489176 961 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 TTC39CP1-201ENST00000512513 755 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.97□□□□□ -1.61
EPHB3P54753 RPL23AP53-201ENST00000521854 457 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.97□□□□□ -1.61
EPHB3P54753 AC107934.1-201ENST00000522215 217 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.97□□□□□ -1.61
EPHB3P54753 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.97□□□□□ -1.61
EPHB3P54753 SNRPGP18-201ENST00000553000 214 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 AC069061.3-201ENST00000582254 823 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.97□□□□□ -1.61
EPHB3P54753 CTHRC1P1-201ENST00000605383 469 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 RNU6-89P-201ENST00000606519 100 ntBASIC4.97□□□□□ -1.61
EPHB3P54753 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
EPHB3P54753 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.97□□□□□ -1.61
EPHB3P54753 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHB3P54753 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
EPHB3P54753 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
EPHB3P54753 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.96□□□□□ -1.61
EPHB3P54753 AL592148.3-201ENST00000608771 2646 ntBASIC4.96□□□□□ -1.61
EPHB3P54753 AL445437.1-201ENST00000623157 3087 ntBASIC4.96□□□□□ -1.61
EPHB3P54753 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
EPHB3P54753 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHB3P54753 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms