Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 COX6CP5-201ENST00000527162 228 ntBASIC5□□□□□ -1.61
EPHB3P54753 OR4R1P-201ENST00000529879 463 ntBASIC5□□□□□ -1.61
EPHB3P54753 AL117187.1-201ENST00000555482 181 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 MIR4697-201ENST00000582977 78 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5□□□□□ -1.61
EPHB3P54753 Z84480.1-201ENST00000605131 311 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC121334.2-201ENST00000605387 271 ntBASIC5□□□□□ -1.61
EPHB3P54753 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 AC084781.2-201ENST00000615568 161 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC091925.1-201ENST00000623204 462 ntBASIC5□□□□□ -1.61
EPHB3P54753 AL133216.2-202ENST00000634512 349 ntBASIC5□□□□□ -1.61
EPHB3P54753 MTND4LP32-201ENST00000636111 270 ntBASIC5□□□□□ -1.61
EPHB3P54753 AC119674.1-207ENST00000641355 633 ntBASIC5□□□□□ -1.61
EPHB3P54753 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
EPHB3P54753 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
EPHB3P54753 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
EPHB3P54753 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5□□□□□ -1.61
EPHB3P54753 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
EPHB3P54753 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5□□□□□ -1.61
EPHB3P54753 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 AC092447.10-201ENST00000620607 1652 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
EPHB3P54753 AC009643.2-201ENST00000603543 1448 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 Y_RNA.231-201ENST00000364358 102 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 MIR568-201ENST00000385036 95 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 MIR514A2-201ENST00000385131 88 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 MIR514A3-201ENST00000385132 88 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 RNA5SP397-201ENST00000391323 118 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC234782.4-201ENST00000417646 1048 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.99□□□□□ -1.61
EPHB3P54753 PMCHL1-202ENST00000423102 261 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.99□□□□□ -1.61
EPHB3P54753 RPL23AP30-201ENST00000432419 501 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 DDX3P2-201ENST00000446138 111 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 H2AFZP5-201ENST00000446960 382 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AL354710.1-201ENST00000453641 246 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC005229.2-201ENST00000456995 399 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC026410.2-201ENST00000460281 156 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC012181.1-201ENST00000479895 423 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC034222.1-201ENST00000494052 532 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.99□□□□□ -1.61
EPHB3P54753 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.99□□□□□ -1.61
EPHB3P54753 RNU6-1220P-201ENST00000517126 108 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC104986.1-201ENST00000517978 436 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.99□□□□□ -1.61
EPHB3P54753 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.99□□□□□ -1.61
EPHB3P54753 IGKV2-36-201ENST00000519999 223 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC009643.1-201ENST00000532030 391 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.99□□□□□ -1.61
EPHB3P54753 OR4T1P-201ENST00000554933 911 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.99□□□□□ -1.61
EPHB3P54753 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.99□□□□□ -1.61
EPHB3P54753 MIR4715-201ENST00000584117 79 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 CYP2C61P-201ENST00000604072 290 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AP001005.3-201ENST00000622049 129 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 AC079597.1-201ENST00000624306 508 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 OR2L1P-202ENST00000641567 1023 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
EPHB3P54753 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
EPHB3P54753 ZFRP1-201ENST00000457579 2970 ntBASIC4.99□□□□□ -1.61
EPHB3P54753 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
EPHB3P54753 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.99□□□□□ -1.61
EPHB3P54753 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.99□□□□□ -1.61
EPHB3P54753 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EPHB3P54753 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EPHB3P54753 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.98□□□□□ -1.61
EPHB3P54753 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.98□□□□□ -1.61
EPHB3P54753 AC105074.1-201ENST00000623380 3095 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
EPHB3P54753 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.98□□□□□ -1.61
EPHB3P54753 AC114546.3-201ENST00000623582 1734 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
EPHB3P54753 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EPHB3P54753 Y_RNA.197-201ENST00000364004 102 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 RNU6-996P-201ENST00000365438 107 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 RNU6-317P-201ENST00000384031 107 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 RNU6-606P-201ENST00000384721 111 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 MIR1-2-201ENST00000384961 85 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 MT-TG-201ENST00000387429 68 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 AL359634.1-202ENST00000404721 284 ntBASIC4.98□□□□□ -1.61
EPHB3P54753 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.98□□□□□ -1.61
EPHB3P54753 Y_RNA.615-201ENST00000410769 117 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms