Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHB3P54753 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
EPHB3P54753 SMG1P6-201ENST00000532337 2930 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHB3P54753 TLK1P1-201ENST00000456760 2440 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHB3P54753 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
EPHB3P54753 RNU6-169P-201ENST00000365336 107 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 RNA5SP187-201ENST00000384400 119 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 SNORD116-29-201ENST00000384516 83 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 RNU6-952P-201ENST00000391164 108 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 RNU2-9P-201ENST00000410194 145 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 UQCRBP1-201ENST00000421129 336 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHB3P54753 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHB3P54753 AL451139.1-201ENST00000434718 346 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 SNRPEP4-201ENST00000435815 279 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 CYCSP24-201ENST00000445119 316 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 ARL2BPP10-201ENST00000446487 531 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC012512.1-201ENST00000446594 718 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC243772.1-201ENST00000451620 410 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHB3P54753 RNU7-152P-201ENST00000458982 64 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 RNU7-63P-201ENST00000459054 62 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 RPL7P22-201ENST00000466005 733 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHB3P54753 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHB3P54753 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHB3P54753 TMEM248P1-201ENST00000510579 951 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 RNU6-714P-201ENST00000516963 103 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 Y_RNA.718-201ENST00000517110 102 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 RNU6-264P-201ENST00000517134 104 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 Y_RNA.720-201ENST00000517166 92 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 SNORA25.17-201ENST00000517184 124 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.04□□□□□ -1.6
EPHB3P54753 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHB3P54753 BNIP3P6-201ENST00000549284 499 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AL110118.1-201ENST00000553543 400 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 HSPE1P3-201ENST00000559254 309 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 SULT1C2P1-202ENST00000562418 459 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 MIR5699-201ENST00000578903 90 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 MIR4284-201ENST00000578924 81 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC090312.1-201ENST00000580637 348 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 MIR4503-201ENST00000582187 83 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 MIR5096-201ENST00000583713 70 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHB3P54753 AC080078.3-201ENST00000605407 463 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AL022345.1-201ENST00000607292 135 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 AC022106.2-201ENST00000620114 757 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 AC009318.4-201ENST00000620496 486 ntBASIC5.04□□□□□ -1.6
EPHB3P54753 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.04□□□□□ -1.6
EPHB3P54753 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.04□□□□□ -1.6
EPHB3P54753 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
EPHB3P54753 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
EPHB3P54753 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.04□□□□□ -1.6
EPHB3P54753 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 AC073343.1-201ENST00000328239 651 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
EPHB3P54753 RPL23AP57-201ENST00000332361 466 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 RN7SKP44-201ENST00000363602 316 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 Y_RNA.255-201ENST00000364581 97 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 SNORA22B-201ENST00000383876 138 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 SNORA70F-201ENST00000384142 135 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
EPHB3P54753 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 AL049697.2-201ENST00000403708 294 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 TPMTP2-201ENST00000414372 726 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC113618.1-201ENST00000416747 285 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 RGS17P1-201ENST00000423358 553 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC019097.1-201ENST00000424783 735 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 C4BPAP2-201ENST00000428434 478 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 GPR143P-201ENST00000434155 205 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms