Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AP001029.2-203ENST00000589795 4910 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
EPHB3P54753 NACAP2-201ENST00000318548 624 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 RNU4-1-201ENST00000363925 141 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 RNU6-1318P-201ENST00000365389 103 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
EPHB3P54753 AL356057.3-201ENST00000402607 340 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 COX5BP7-201ENST00000414780 274 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 NDUFB4P5-201ENST00000415445 361 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC092162.1-201ENST00000432828 434 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 RPS17P8-201ENST00000434525 335 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.06□□□□□ -1.6
EPHB3P54753 RPL7P15-201ENST00000461190 712 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 RPL23AP12-201ENST00000467573 473 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AC233702.1-201ENST00000482905 502 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 EIF4EP3-201ENST00000498782 656 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.06□□□□□ -1.6
EPHB3P54753 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.06□□□□□ -1.6
EPHB3P54753 COX6B1P6-201ENST00000522347 255 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.06□□□□□ -1.6
EPHB3P54753 AF279873.1-201ENST00000523393 313 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC004817.2-201ENST00000561794 651 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC209154.1-201ENST00000582156 337 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC010680.4-201ENST00000605334 543 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC090425.1-201ENST00000610007 140 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 AL442067.1-201ENST00000613261 223 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.06□□□□□ -1.6
EPHB3P54753 AC073869.10-201ENST00000642016 354 ntBASIC5.06□□□□□ -1.6
EPHB3P54753 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EPHB3P54753 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EPHB3P54753 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.06□□□□□ -1.6
EPHB3P54753 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
EPHB3P54753 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
EPHB3P54753 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 RNU6-1309P-201ENST00000363305 108 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 RNU6-1097P-201ENST00000363586 107 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 SNORA20.2-201ENST00000383922 131 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 Y_RNA.445-201ENST00000384168 102 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 RNU6-1297P-201ENST00000384415 104 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.05□□□□□ -1.6
EPHB3P54753 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 AC073069.1-201ENST00000428657 441 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.05□□□□□ -1.6
EPHB3P54753 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.05□□□□□ -1.6
EPHB3P54753 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.05□□□□□ -1.6
EPHB3P54753 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.05□□□□□ -1.6
EPHB3P54753 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.05□□□□□ -1.6
EPHB3P54753 RPS15AP17-201ENST00000470598 390 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AC078785.3-201ENST00000476607 425 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 RN7SL558P-201ENST00000497468 299 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AK3P4-201ENST00000504283 583 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 NPM1P41-201ENST00000512920 831 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.05□□□□□ -1.6
EPHB3P54753 AC008562.1-201ENST00000521763 330 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 COX6CP8-201ENST00000522620 226 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.05□□□□□ -1.6
EPHB3P54753 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.05□□□□□ -1.6
EPHB3P54753 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.05□□□□□ -1.6
EPHB3P54753 FRG2DP-202ENST00000566967 323 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 RN7SL802P-201ENST00000577858 299 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 AC006272.2-201ENST00000594725 163 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AL627309.6-201ENST00000606857 840 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.05□□□□□ -1.6
EPHB3P54753 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.05□□□□□ -1.6
EPHB3P54753 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 DHX40P1-201ENST00000588725 1412 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
EPHB3P54753 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 AC006020.1-201ENST00000420179 1854 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 AL442639.1-201ENST00000625030 1899 ntBASIC5.05□□□□□ -1.6
EPHB3P54753 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
EPHB3P54753 AC010300.1-201ENST00000600671 5134 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms