Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC063976.2-201ENST00000425667 3556 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHB3P54753 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
EPHB3P54753 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 RNU6-1151P-201ENST00000384684 107 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 HMGB1P17-201ENST00000403495 628 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 RPL5P18-201ENST00000406671 891 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 U3.32-201ENST00000408116 212 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.13□□□□□ -1.59
EPHB3P54753 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC009161.1-201ENST00000417306 376 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.13□□□□□ -1.59
EPHB3P54753 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 Z82205.1-201ENST00000428456 297 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC005154.2-201ENST00000438110 379 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.13□□□□□ -1.59
EPHB3P54753 RN7SL481P-201ENST00000477764 299 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AL161747.1-201ENST00000480068 358 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 RN7SL459P-201ENST00000481078 302 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 RPSAP51-201ENST00000497462 645 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 RNU6-201P-201ENST00000517100 61 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.13□□□□□ -1.59
EPHB3P54753 AP003072.2-201ENST00000527756 676 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 VN1R107P-201ENST00000601784 209 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 AL355472.4-201ENST00000610233 626 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 FAM27B-201ENST00000610601 213 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.13□□□□□ -1.59
EPHB3P54753 MIR7973-1-201ENST00000614683 76 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 AC138965.3-201ENST00000623875 498 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EPHB3P54753 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHB3P54753 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
EPHB3P54753 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.13□□□□□ -1.59
EPHB3P54753 MTND4P35-201ENST00000604257 1375 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
EPHB3P54753 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHB3P54753 AC025125.1-201ENST00000624743 1922 ntBASIC5.13□□□□□ -1.59
EPHB3P54753 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EPHB3P54753 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EPHB3P54753 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHB3P54753 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
EPHB3P54753 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 NUP58P1-201ENST00000502546 1738 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
EPHB3P54753 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 RPL7P26-201ENST00000333817 754 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 Y_RNA.46-201ENST00000362695 102 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 RNU6-223P-201ENST00000362830 107 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 Y_RNA.259-201ENST00000364619 101 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EPHB3P54753 RNU6-456P-201ENST00000384493 107 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AL357515.1-201ENST00000402967 542 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHB3P54753 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHB3P54753 DNAJC19P7-201ENST00000428811 344 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.12□□□□□ -1.59
EPHB3P54753 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 AL359265.2-201ENST00000434367 631 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 AC010326.1-201ENST00000462726 602 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AL163540.1-201ENST00000485382 386 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 RPL38P4-201ENST00000502376 214 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 RNA5SP392-201ENST00000516905 112 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 BTF3P12-201ENST00000519620 469 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC022616.6-201ENST00000520479 119 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 OR5M2P-201ENST00000529003 936 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.12□□□□□ -1.59
EPHB3P54753 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.12□□□□□ -1.59
EPHB3P54753 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.12□□□□□ -1.59
EPHB3P54753 SULT1C2P2-201ENST00000562517 294 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.12□□□□□ -1.59
EPHB3P54753 AC090751.1-201ENST00000566966 267 ntBASIC5.12□□□□□ -1.59
EPHB3P54753 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms