Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 OR5J1P-201ENST00000313544 939 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 RNA5SP191-201ENST00000362585 102 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 Y_RNA.146-201ENST00000363549 102 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 OR52E6-202ENST00000379946 954 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 MIR559-201ENST00000385188 96 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 MIR320B1-201ENST00000390209 79 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
EPHB3P54753 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 AL162578.1-201ENST00000406202 378 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 TXNP7-201ENST00000406296 293 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 NPM1P40-201ENST00000412758 733 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHB3P54753 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHB3P54753 RPS7P5-201ENST00000441482 581 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHB3P54753 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHB3P54753 CBX1P2-201ENST00000453841 458 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHB3P54753 Y_RNA.639-201ENST00000458981 102 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 SNORD19B-201ENST00000459623 84 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHB3P54753 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHB3P54753 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHB3P54753 RPS27AP18-201ENST00000515536 459 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 Y_RNA.691-201ENST00000516611 103 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHB3P54753 HIGD1AP6-201ENST00000521833 279 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHB3P54753 OR8A2P-201ENST00000528631 952 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHB3P54753 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHB3P54753 AC079075.1-201ENST00000559543 878 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHB3P54753 AC090525.3-201ENST00000605601 189 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AC008966.2-201ENST00000606157 453 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 RNU6-87P-201ENST00000607561 108 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 AC243773.3-201ENST00000613270 256 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHB3P54753 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHB3P54753 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHB3P54753 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHB3P54753 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHB3P54753 A2MP1-204ENST00000566278 4130 ntBASIC5.2□□□□□ -1.58
EPHB3P54753 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHB3P54753 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHB3P54753 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EPHB3P54753 ASNSP1-204ENST00000641977 1664 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
EPHB3P54753 RNU6-115P-201ENST00000364310 107 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 SNORA33.2-201ENST00000365413 134 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 SNORA69-201ENST00000383895 132 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 Y_RNA.384-201ENST00000383909 102 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 RNU6-510P-201ENST00000391239 108 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
EPHB3P54753 AL356967.1-201ENST00000406305 431 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 MIR320C1-201ENST00000408566 88 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 RNU2-8P-201ENST00000410727 190 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 RNU6-1068P-201ENST00000410958 103 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 FAR2P2-201ENST00000413041 594 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AC018630.2-202ENST00000422992 927 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 FAR2P4-202ENST00000425399 584 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHB3P54753 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AC073264.2-201ENST00000448886 166 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 NDUFA5P7-201ENST00000452914 242 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AURKAPS2-201ENST00000454983 333 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.19□□□□□ -1.58
EPHB3P54753 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.19□□□□□ -1.58
EPHB3P54753 AC013356.1-201ENST00000489027 564 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AC011005.3-201ENST00000491624 395 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHB3P54753 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.19□□□□□ -1.58
EPHB3P54753 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHB3P54753 SNORA40.12-201ENST00000516329 111 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHB3P54753 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHB3P54753 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHB3P54753 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.19□□□□□ -1.58
EPHB3P54753 AC234771.5-201ENST00000600161 514 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.19□□□□□ -1.58
EPHB3P54753 SNRPGP17-201ENST00000603780 214 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.19□□□□□ -1.58
EPHB3P54753 AC011373.1-201ENST00000607270 237 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AP001521.1-201ENST00000609150 300 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 MIR6780A-201ENST00000615089 68 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 AL049794.2-201ENST00000616301 365 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 7SK.10-201ENST00000621414 298 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 CR381572.2-201ENST00000624852 397 ntBASIC5.19□□□□□ -1.58
EPHB3P54753 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.19□□□□□ -1.58
EPHB3P54753 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
EPHB3P54753 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
EPHB3P54753 AC008079.2-201ENST00000623543 20396 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 407 ms