Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB9Q9Y5E1 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
PCDHB9Q9Y5E1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
PCDHB9Q9Y5E1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.21□□□□□ -1.41
PCDHB9Q9Y5E1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 RNU6-1284P-201ENST00000363701 100 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 RNU4-2-201ENST00000365668 141 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 SNORA16.2-201ENST00000390991 127 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AP003170.5-201ENST00000397185 335 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 MIR548I3-201ENST00000408378 149 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 MIR548I1-201ENST00000408810 149 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 RNA5SP156-201ENST00000410250 110 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 RPL23AP69-201ENST00000431134 458 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC104472.2-201ENST00000469035 601 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 RPL22P13-201ENST00000493291 347 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 TBCAP3-201ENST00000512475 312 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC016065.2-201ENST00000514530 444 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 GAPDHP62-201ENST00000515313 990 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 RNA5SP340-201ENST00000517132 107 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 SULT1C2P2-201ENST00000562517 294 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC007225.2-201ENST00000562529 256 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC124068.1-201ENST00000563131 678 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC092692.1-201ENST00000623625 2595 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 AC009951.1-201ENST00000623674 2614 ntBASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB9Q9Y5E1 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 SNORA21-201ENST00000362423 132 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 RNA5SP242-201ENST00000364171 118 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 SNORD70.1-201ENST00000391007 85 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AL109755.1-201ENST00000401791 649 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC116036.1-201ENST00000412199 367 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AL590632.1-201ENST00000424289 371 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 RPL7P37-201ENST00000425095 738 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC130360.1-201ENST00000425489 1117 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 HIGD1AP11-201ENST00000438361 280 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC243772.1-201ENST00000451620 410 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC002553.3-201ENST00000453002 341 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 RNU7-167P-201ENST00000459160 62 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 RN7SL432P-201ENST00000484057 298 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 COX6B1P2-201ENST00000489624 230 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 RNU6-475P-201ENST00000516073 104 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 RNA5SP434-201ENST00000516647 121 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC100870.1-201ENST00000522035 505 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC130365.2-201ENST00000525882 1201 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC079600.1-201ENST00000550326 297 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC092121.1-201ENST00000569452 202 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AL451044.1-201ENST00000604867 238 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AL512652.1-201ENST00000619006 500 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 AC022325.1-201ENST00000502748 2199 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 SHQ1P1-201ENST00000437111 1544 ntBASIC6.2□□□□□ -1.42
PCDHB9Q9Y5E1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDHB9Q9Y5E1 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB9Q9Y5E1 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB9Q9Y5E1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB9Q9Y5E1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB9Q9Y5E1 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms