Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
EPHB3P54753 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.4□□□□□ -1.55
EPHB3P54753 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
EPHB3P54753 VPS35P1-201ENST00000563400 1518 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 DBF4P1-201ENST00000412976 1892 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 Y_RNA.58-201ENST00000362807 102 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 Y_RNA.154-201ENST00000363624 102 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 RNY3P3-201ENST00000363816 102 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 RNY3P1-201ENST00000365085 102 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 RNY3-201ENST00000365484 102 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 RNU6-533P-201ENST00000384144 107 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 Y_RNA.481-201ENST00000384373 102 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 Y_RNA.490-201ENST00000384413 102 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 SNORA51.12-201ENST00000384448 134 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
EPHB3P54753 Y_RNA.608-201ENST00000410647 95 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHB3P54753 CHEK2P3-201ENST00000416118 248 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHB3P54753 AC114814.2-201ENST00000419195 485 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 OR2AM1P-201ENST00000422137 422 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 AC109583.1-201ENST00000432156 268 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 FTLP19-201ENST00000433300 394 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 NOP56P2-201ENST00000447491 769 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHB3P54753 C1DP4-201ENST00000455429 424 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 RPS20P20-201ENST00000460498 340 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC092324.1-201ENST00000468671 324 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC090602.1-201ENST00000469695 252 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC104687.1-201ENST00000485829 412 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC140172.1-201ENST00000502928 141 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 AP003467.2-201ENST00000520175 319 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.39□□□□□ -1.55
EPHB3P54753 AC136777.2-201ENST00000522979 358 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 DEFB131D-201ENST00000526803 184 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC068587.4-201ENST00000533893 186 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHB3P54753 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.39□□□□□ -1.55
EPHB3P54753 HIF1AP1-201ENST00000553642 175 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 CYCSP2-201ENST00000558168 301 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC037471.2-201ENST00000564941 598 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 AC141257.3-201ENST00000572906 215 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.39□□□□□ -1.55
EPHB3P54753 NRBF2P1-201ENST00000587407 859 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AL136363.1-201ENST00000605349 337 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC116312.1-201ENST00000606841 314 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.39□□□□□ -1.55
EPHB3P54753 AP004247.3-201ENST00000608682 624 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 MIR6748-201ENST00000610433 71 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.39□□□□□ -1.55
EPHB3P54753 MIR6820-201ENST00000611508 62 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AL627230.1-201ENST00000613077 211 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AL591926.8-201ENST00000616876 211 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 AC139792.3-201ENST00000623525 224 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 CASC19-260ENST00000641828 2001 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.39□□□□□ -1.55
EPHB3P54753 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.39□□□□□ -1.55
EPHB3P54753 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
EPHB3P54753 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.39□□□□□ -1.55
EPHB3P54753 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
EPHB3P54753 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
EPHB3P54753 AP000473.2-201ENST00000602659 1537 ntBASIC5.38□□□□□ -1.55
EPHB3P54753 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.38□□□□□ -1.55
EPHB3P54753 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.38□□□□□ -1.55
EPHB3P54753 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.38□□□□□ -1.55
EPHB3P54753 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EPHB3P54753 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHB3P54753 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.38□□□□□ -1.55
EPHB3P54753 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHB3P54753 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EPHB3P54753 RN7SKP95-201ENST00000362860 303 ntBASIC5.38□□□□□ -1.55
EPHB3P54753 RNA5SP428-201ENST00000365129 132 ntBASIC5.38□□□□□ -1.55
EPHB3P54753 RNA5SP223-201ENST00000365174 120 ntBASIC5.38□□□□□ -1.55
EPHB3P54753 SNORA70.6-201ENST00000383934 134 ntBASIC5.38□□□□□ -1.55
EPHB3P54753 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
EPHB3P54753 AL360081.1-201ENST00000428299 555 ntBASIC5.38□□□□□ -1.55
EPHB3P54753 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms