Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EPHB3P54753 AC021242.1-201ENST00000507315 2035 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
EPHB3P54753 AP005432.1-201ENST00000580891 3485 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
EPHB3P54753 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
EPHB3P54753 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.43□□□□□ -1.54
EPHB3P54753 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 MTND4P27-201ENST00000450813 1354 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 AC068870.3-201ENST00000625077 2536 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 AL034549.2-201ENST00000618285 3373 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 RNA5SP443-201ENST00000363083 132 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 SNORD81.2-201ENST00000365153 76 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 Y_RNA.431-201ENST00000384086 102 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
EPHB3P54753 RNU6-908P-201ENST00000410160 94 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 JKAMPP1-201ENST00000413804 919 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.42□□□□□ -1.54
EPHB3P54753 MTND3P17-201ENST00000416968 344 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 BX295541.1-201ENST00000417774 250 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 AL953862.1-201ENST00000423016 168 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 AC002486.1-201ENST00000435098 391 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 PRPF38AP2-201ENST00000438179 851 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.42□□□□□ -1.54
EPHB3P54753 Z80107.2-201ENST00000445127 392 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.42□□□□□ -1.54
EPHB3P54753 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.42□□□□□ -1.54
EPHB3P54753 MTCO3P20-201ENST00000454926 688 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 KLRA1P-201ENST00000503499 986 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.42□□□□□ -1.54
EPHB3P54753 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.42□□□□□ -1.54
EPHB3P54753 HMGB1P28-201ENST00000507778 552 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 COX6B1P5-201ENST00000509843 249 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.42□□□□□ -1.54
EPHB3P54753 AC022690.1-201ENST00000526681 550 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.42□□□□□ -1.54
EPHB3P54753 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.42□□□□□ -1.54
EPHB3P54753 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.42□□□□□ -1.54
EPHB3P54753 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.42□□□□□ -1.54
EPHB3P54753 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.42□□□□□ -1.54
EPHB3P54753 MIR4691-201ENST00000583764 85 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC104785.1-201ENST00000603220 588 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC106900.2-201ENST00000604994 317 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC008121.3-201ENST00000618726 433 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AL158801.5-201ENST00000623123 465 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC116563.2-201ENST00000624751 535 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 AC138305.3-201ENST00000624988 240 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.42□□□□□ -1.54
EPHB3P54753 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.42□□□□□ -1.54
EPHB3P54753 CASC19-221ENST00000641309 1382 ntBASIC5.42□□□□□ -1.54
EPHB3P54753 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
EPHB3P54753 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EPHB3P54753 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
EPHB3P54753 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
EPHB3P54753 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EPHB3P54753 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
EPHB3P54753 AC007996.1-201ENST00000620414 2821 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
EPHB3P54753 AL355488.2-201ENST00000609909 2850 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
EPHB3P54753 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EPHB3P54753 RNU6-216P-201ENST00000363282 104 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 RNU6-738P-201ENST00000384531 106 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
EPHB3P54753 AL356432.1-201ENST00000405809 419 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AL603766.1-201ENST00000407763 664 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AL450992.3-201ENST00000413192 568 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 COX6B1P1-201ENST00000415962 213 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 MTCO3P12-201ENST00000416718 547 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 PIGFP2-201ENST00000421400 651 ntBASIC5.41□□□□□ -1.54
EPHB3P54753 AL353729.1-201ENST00000425044 720 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms