Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RPS3AP41-201ENST00000462701 778 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AC010307.1-201ENST00000467206 836 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AC007537.2-201ENST00000472093 511 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AC083982.1-201ENST00000485679 344 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.44□□□□□ -1.54
EPHB3P54753 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
EPHB3P54753 AC010493.1-201ENST00000513479 292 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
EPHB3P54753 RNA5SP135-201ENST00000517019 125 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 IGHV3-63-201ENST00000518422 341 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.44□□□□□ -1.54
EPHB3P54753 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.44□□□□□ -1.54
EPHB3P54753 AP003034.1-201ENST00000534621 422 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.44□□□□□ -1.54
EPHB3P54753 AL390334.1-201ENST00000556395 450 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.44□□□□□ -1.54
EPHB3P54753 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.44□□□□□ -1.54
EPHB3P54753 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 MIR7853-201ENST00000584820 132 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.44□□□□□ -1.54
EPHB3P54753 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 PRELID3BP8-201ENST00000604148 295 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
EPHB3P54753 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
EPHB3P54753 LINC00561-201ENST00000565815 2738 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 GDI2P1-201ENST00000429312 1336 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
EPHB3P54753 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
EPHB3P54753 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
EPHB3P54753 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
EPHB3P54753 AC020633.1-201ENST00000468439 2247 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EPHB3P54753 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.43□□□□□ -1.54
EPHB3P54753 AC092070.2-203ENST00000598377 3644 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.43□□□□□ -1.54
EPHB3P54753 RNU6-1066P-201ENST00000363573 105 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 Y_RNA.166-201ENST00000363730 102 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.43□□□□□ -1.54
EPHB3P54753 RNU1-74P-201ENST00000384108 171 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 RNU6-98P-201ENST00000384173 107 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 U8.14-201ENST00000390843 143 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 HMGB3P7-201ENST00000400214 611 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
EPHB3P54753 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EPHB3P54753 RNA5SP118-201ENST00000410385 109 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 PDCL2P1-201ENST00000419302 352 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 SDCBPP2-201ENST00000424643 885 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC104837.2-201ENST00000427236 424 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 RPL23AP4-201ENST00000427757 463 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EPHB3P54753 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 AL513175.1-201ENST00000431492 780 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 BMS1P19-201ENST00000433925 393 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 RPL31P44-201ENST00000447680 377 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC079448.1-201ENST00000449377 373 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 NPM1P39-201ENST00000449818 867 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC108463.1-201ENST00000450258 347 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 RPL18AP17-201ENST00000455326 198 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 PSMC1P13-201ENST00000458195 985 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 RPL35P6-201ENST00000490024 372 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.43□□□□□ -1.54
EPHB3P54753 AC010486.1-201ENST00000511793 424 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 RNU6-1281P-201ENST00000516223 105 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.43□□□□□ -1.54
EPHB3P54753 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.43□□□□□ -1.54
EPHB3P54753 AP003122.4-201ENST00000530980 758 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 SLC2A13P1-201ENST00000531560 322 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.43□□□□□ -1.54
EPHB3P54753 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 AC008127.2-201ENST00000549925 1075 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC078814.3-201ENST00000553036 491 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 AL121821.2-201ENST00000556081 394 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.43□□□□□ -1.54
EPHB3P54753 AC107954.1-201ENST00000565906 727 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC138915.2-201ENST00000569776 97 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.43□□□□□ -1.54
EPHB3P54753 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.43□□□□□ -1.54
EPHB3P54753 VN1R80P-201ENST00000597126 338 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 FAM25E-202ENST00000608562 189 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 Z95327.3-201ENST00000610385 572 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC234782.5-201ENST00000617723 324 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 AC000095.2-202ENST00000637415 154 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 UGT2B26P-201ENST00000508672 1613 ntBASIC5.43□□□□□ -1.54
EPHB3P54753 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
EPHB3P54753 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 329.2 ms