Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.46□□□□□ -1.54
EPHB3P54753 GTF2H2B-203ENST00000508065 1432 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
EPHB3P54753 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 AL121950.1-201ENST00000624993 2077 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
EPHB3P54753 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
EPHB3P54753 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EPHB3P54753 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
EPHB3P54753 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
EPHB3P54753 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
EPHB3P54753 MTCO1P7-201ENST00000419523 1542 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
EPHB3P54753 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 SNORA51.2-201ENST00000364595 132 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 Y_RNA.409-201ENST00000383990 98 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 SNORA51.8-201ENST00000384234 132 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
EPHB3P54753 PEX12P1-201ENST00000400284 1048 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 Z97832.1-201ENST00000402490 328 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AL049693.1-201ENST00000402760 611 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 OR51A3P-201ENST00000413596 924 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.45□□□□□ -1.54
EPHB3P54753 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 MTCO2P12-201ENST00000427426 682 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC009961.2-201ENST00000435771 251 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 TAAR7P-201ENST00000436141 242 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 KNOP1P3-201ENST00000446933 426 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.45□□□□□ -1.54
EPHB3P54753 FABP3P2-201ENST00000453169 399 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AP000797.2-201ENST00000475768 606 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 ACTR3P3-201ENST00000480448 893 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 RN7SL244P-201ENST00000493405 297 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.45□□□□□ -1.54
EPHB3P54753 IGBP1P4-201ENST00000503202 879 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.45□□□□□ -1.54
EPHB3P54753 SNORA70.11-201ENST00000515987 138 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 SNORA70.13-201ENST00000516116 138 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 HSPA8P13-201ENST00000523715 472 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.45□□□□□ -1.54
EPHB3P54753 MIR4480-201ENST00000582492 71 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 RPL12P25-202ENST00000598100 674 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC108738.1-201ENST00000603703 237 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC008814.1-201ENST00000603797 406 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC115286.1-201ENST00000604298 434 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 AC010205.1-201ENST00000616668 449 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 AC243756.2-201ENST00000618406 463 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
EPHB3P54753 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
EPHB3P54753 MUC2-202ENST00000613187 4845 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
EPHB3P54753 OR5BR1P-201ENST00000524992 1330 ntBASIC5.45□□□□□ -1.54
EPHB3P54753 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
EPHB3P54753 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.45□□□□□ -1.54
EPHB3P54753 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 SMG1P7-201ENST00000565246 2704 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.44□□□□□ -1.54
EPHB3P54753 RNU6-845P-201ENST00000362578 103 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 RN7SKP104-201ENST00000362605 328 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 Y_RNA.86-201ENST00000363020 111 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 SUGT1P1-201ENST00000379514 476 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 RNU6-767P-201ENST00000384132 107 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 RNU6-185P-201ENST00000384421 107 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
EPHB3P54753 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.44□□□□□ -1.54
EPHB3P54753 RN7SKP114-201ENST00000410327 279 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.44□□□□□ -1.54
EPHB3P54753 ACTR3P2-201ENST00000439585 1257 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 HMGB3P9-201ENST00000441799 583 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 MTND6P13-201ENST00000443510 523 ntBASIC5.44□□□□□ -1.54
EPHB3P54753 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.44□□□□□ -1.54
EPHB3P54753 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms