Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
EPHB3P54753 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
EPHB3P54753 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHB3P54753 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 RNA5SP123-201ENST00000363244 119 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 RNU6-1085P-201ENST00000363576 107 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 RN7SKP153-201ENST00000365026 316 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 Y_RNA.394-201ENST00000383942 103 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
EPHB3P54753 RPL37P18-201ENST00000411602 243 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 HMGB1P11-201ENST00000413899 637 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 VN1R36P-201ENST00000414936 291 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 GJA6P-201ENST00000415117 1042 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 SKP1P3-201ENST00000429280 487 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC093716.1-201ENST00000435923 377 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 PPIAP17-201ENST00000438507 471 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC104306.1-201ENST00000449702 371 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 BX248409.1-201ENST00000455497 255 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 RPL7AP52-201ENST00000458096 790 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 ABCC13-202ENST00000463099 3842 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC091564.1-201ENST00000464563 479 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC096576.1-201ENST00000489014 359 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 RPL39P36-201ENST00000490784 156 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC012170.1-201ENST00000495139 359 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.48□□□□□ -1.53
EPHB3P54753 KCTD9P2-201ENST00000512203 1013 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC108064.1-201ENST00000513791 460 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 CDH12P4-201ENST00000517835 295 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 CDH12P3-201ENST00000517935 295 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 CDH12P1-201ENST00000518435 295 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC109635.6-201ENST00000525487 1113 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.48□□□□□ -1.53
EPHB3P54753 OR4A12P-201ENST00000530847 918 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 HPRT1P3-201ENST00000539521 576 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 AC012182.1-201ENST00000570133 895 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 MIR3934-201ENST00000579806 107 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHB3P54753 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC011487.3-201ENST00000593607 453 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AL451049.1-201ENST00000608672 497 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC093388.1-201ENST00000609166 430 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AL132765.2-201ENST00000610812 351 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 AC100827.5-201ENST00000615883 426 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC079684.1-201ENST00000621405 437 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
EPHB3P54753 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
EPHB3P54753 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 AC107982.1-201ENST00000507171 1300 ntBASIC5.48□□□□□ -1.53
EPHB3P54753 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHB3P54753 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
EPHB3P54753 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHB3P54753 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 RLIMP2-201ENST00000427891 1563 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 CDR1-202ENST00000625883 1485 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
EPHB3P54753 RNU6-244P-201ENST00000391028 104 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AL078599.1-201ENST00000402075 293 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 RSU1P3-201ENST00000412878 835 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AC013429.2-201ENST00000418798 781 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 SNRPEP10-201ENST00000420249 274 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 OR4F13P-201ENST00000428478 931 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 AC007559.1-201ENST00000428736 355 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms