Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 MIR4435-1-201ENST00000582552 80 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 RPL35AP12-201ENST00000425362 338 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AC006028.1-201ENST00000438379 402 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AC010469.1-201ENST00000463864 576 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 BRDTP1-201ENST00000605735 677 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AL359535.1-201ENST00000612100 1087 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 uc_338.25-201ENST00000613756 156 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AC241377.1-201ENST00000619797 406 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 CR383658.2-201ENST00000547576 1525 ntBASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHANK3Q9BYB0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 XGY1-201ENST00000381172 446 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 SNORD67-201ENST00000390833 111 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 YWHAEP5-201ENST00000431545 765 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC108734.1-201ENST00000439549 399 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 RPL5P16-201ENST00000471467 790 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 TRBV12-1-201ENST00000479785 344 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC006557.5-201ENST00000603126 811 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC006946.3-201ENST00000609791 756 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AL162574.2-201ENST00000614618 657 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC009159.1-201ENST00000618386 642 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AL031679.1-201ENST00000400616 525 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 RNA5SP39-201ENST00000411245 120 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 TXNP1-201ENST00000441872 371 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC140076.1-201ENST00000449897 361 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 S100A11P1-201ENST00000477525 312 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 KCTD9P6-201ENST00000522306 950 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 UBL5P2-201ENST00000583788 219 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC233309.1-201ENST00000619522 751 ntBASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHANK3Q9BYB0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 AC017007.4-201ENST00000503353 1352 ntBASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 AC105272.1-201ENST00000438604 198 ntBASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 RPL7P36-201ENST00000444633 681 ntBASIC4.23□□□□□ -1.73
SHANK3Q9BYB0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms