Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC016590.3-201ENST00000611171 753 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AL158062.1-201ENST00000619632 745 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AP003485.2-201ENST00000623636 610 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC010149.2-201ENST00000637608 315 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 MTCO1P7-201ENST00000419523 1542 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AL138885.1-201ENST00000405921 675 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC073069.1-201ENST00000428657 441 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 OR10D4P-201ENST00000525892 951 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AC073869.7-201ENST00000640874 297 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 AL513302.2-201ENST00000562313 1842 ntBASIC4.29□□□□□ -1.72
SHANK3Q9BYB0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC073325.2-201ENST00000339545 159 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 OR5H2-201ENST00000355273 945 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 HSPE1P8-201ENST00000406997 288 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 BTF3P9-201ENST00000418784 283 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 RPS26P47-201ENST00000427219 348 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 RPS26P3-201ENST00000470205 348 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC004057.1-201ENST00000485827 348 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 FAM172BP-201ENST00000487497 1089 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 NDUFB9P3-201ENST00000521269 501 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC006518.1-201ENST00000541449 943 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 GTF3AP2-201ENST00000557014 266 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 NRBF2P5-201ENST00000603087 788 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC233280.2-201ENST00000603917 1070 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 AC018692.3-201ENST00000623929 123 ntBASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHANK3Q9BYB0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 RNU6-283P-201ENST00000364788 107 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 AL353678.1-201ENST00000422735 741 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 AC069499.1-201ENST00000489433 509 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 OOSP1P2-201ENST00000579644 351 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 AL157817.1-201ENST00000614264 790 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 AC108206.1-201ENST00000570186 4159 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 THAP12P8-201ENST00000447914 2115 ntBASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.27□□□□□ -1.73
SHANK3Q9BYB0 AC002524.1-201ENST00000411687 547 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC006989.1-201ENST00000427212 131 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AL603825.1-201ENST00000438481 80 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AL356535.1-201ENST00000440335 398 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC005229.2-201ENST00000456995 399 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC074276.2-201ENST00000619891 348 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC079298.2-201ENST00000623885 459 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC139713.2-210ENST00000641741 992 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 MTND5P12-201ENST00000502851 1449 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 NANOGP6-201ENST00000429190 847 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC010374.2-201ENST00000512933 535 ntBASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.26□□□□□ -1.73
SHANK3Q9BYB0 PSMA2P1-201ENST00000526365 646 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 424.5 ms