Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6-839P-201ENST00000363347 108 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 RNU6-619P-201ENST00000365146 108 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 RNU6-723P-201ENST00000383973 107 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 RNU6-452P-201ENST00000384406 107 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 RNU6-1300P-201ENST00000391046 108 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 EI24P3-201ENST00000399046 1062 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 RBMY2KP-201ENST00000418221 992 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.51□□□□□ -1.53
EPHB3P54753 PGBD4P3-201ENST00000440731 581 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 CALM1P1-201ENST00000442082 433 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.51□□□□□ -1.53
EPHB3P54753 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.51□□□□□ -1.53
EPHB3P54753 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.51□□□□□ -1.53
EPHB3P54753 HIGD1AP8-201ENST00000453927 274 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 DNAJB5P1-201ENST00000454004 806 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 snoU13.29-201ENST00000459370 104 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.51□□□□□ -1.53
EPHB3P54753 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.51□□□□□ -1.53
EPHB3P54753 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.51□□□□□ -1.53
EPHB3P54753 AC026412.2-201ENST00000512270 1075 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.51□□□□□ -1.53
EPHB3P54753 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 RNU6-327P-201ENST00000516270 127 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 RNU6-1004P-201ENST00000516584 111 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 Y_RNA.693-201ENST00000516641 110 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 RN7SKP260-201ENST00000516907 149 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 ARL2BPP5-201ENST00000523141 481 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.51□□□□□ -1.53
EPHB3P54753 EIF4A2P5-201ENST00000529914 499 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.51□□□□□ -1.53
EPHB3P54753 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.51□□□□□ -1.53
EPHB3P54753 MIR5697-201ENST00000578045 78 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.51□□□□□ -1.53
EPHB3P54753 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.51□□□□□ -1.53
EPHB3P54753 AC010487.1-201ENST00000594408 1172 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AP001429.1-201ENST00000602568 530 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.51□□□□□ -1.53
EPHB3P54753 NRBF2P5-201ENST00000603087 788 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 BNIP3P10-201ENST00000605360 577 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC093799.2-201ENST00000610062 578 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AP001784.1-201ENST00000624107 428 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC068880.5-201ENST00000624331 290 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 AC099654.6-201ENST00000636487 512 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
EPHB3P54753 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.51□□□□□ -1.53
EPHB3P54753 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
EPHB3P54753 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 AC100871.1-201ENST00000507871 1456 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.51□□□□□ -1.53
EPHB3P54753 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
EPHB3P54753 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 RNA5SP90-201ENST00000364801 99 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 RNU6-1103P-201ENST00000384150 107 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
EPHB3P54753 SNRPEP2-201ENST00000397592 279 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AC025750.1-201ENST00000399891 379 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.5□□□□□ -1.53
EPHB3P54753 MIR1182-201ENST00000408363 97 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 RPS3AP3-201ENST00000411933 242 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AMD1P2-201ENST00000412936 992 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.5□□□□□ -1.53
EPHB3P54753 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.5□□□□□ -1.53
EPHB3P54753 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
EPHB3P54753 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.5□□□□□ -1.53
EPHB3P54753 AL035410.1-201ENST00000427409 427 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 366.7 ms