Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC124312.4-201ENST00000605533 310 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 OR7M1P-201ENST00000608946 533 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC007656.2-201ENST00000624902 4547 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AL645937.1-201ENST00000641739 1652 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC092447.2-201ENST00000435487 669 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 NPM1P48-201ENST00000436002 853 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC107083.1-201ENST00000439643 279 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC023141.12-201ENST00000512399 199 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 RN7SKP209-201ENST00000516888 304 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC092747.2-201ENST00000545069 983 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC008638.3-201ENST00000603341 463 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AL163642.2-201ENST00000604722 1019 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AL732618.1-201ENST00000623251 301 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 DDX6P1-205ENST00000441966 1436 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 RHOT1P2-201ENST00000366423 333 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 MIR513A2-201ENST00000385249 127 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 SETP15-201ENST00000412724 337 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 RPL21P109-201ENST00000422213 475 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 AP000942.1-201ENST00000463969 747 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 AC084357.1-201ENST00000473404 255 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 AC073522.1-201ENST00000483312 377 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 RPL7P38-201ENST00000488396 739 ntBASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK3Q9BYB0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 RPL6P21-201ENST00000418672 846 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 AC092809.1-201ENST00000441469 474 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 AC099563.1-201ENST00000456086 418 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 HMGB1P21-201ENST00000502313 581 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 IGKV2-26-201ENST00000518305 343 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 AC105227.2-201ENST00000615075 605 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 AC022149.2-201ENST00000621061 203 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 AC138627.1-204ENST00000641894 765 ntBASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.53□□□□□ -1.68
SHANK3Q9BYB0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 RIOK3P1-201ENST00000418778 1528 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 RNU6-729P-201ENST00000384399 107 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 SNORA44-201ENST00000384584 132 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC020633.1-201ENST00000468439 2247 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC009464.1-201ENST00000615731 469 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms