Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AL024507.1-201ENST00000412741 274 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 MOB1AP1-201ENST00000430903 535 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC138932.5-201ENST00000617759 563 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 SNORA5B-201ENST00000363786 132 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 RNA5SP42-201ENST00000364278 115 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 HLFP1-201ENST00000402375 499 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC063979.1-201ENST00000415539 377 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 RN7SL504P-201ENST00000494496 287 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC109458.1-201ENST00000508858 316 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC135001.1-201ENST00000544546 283 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AC018690.1-201ENST00000608144 626 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 MIR7106-201ENST00000612419 65 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 AL590240.3-201ENST00000621416 943 ntBASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHANK3Q9BYB0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 U3.19-201ENST00000390893 196 ntBASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 AC109925.1-201ENST00000478069 331 ntBASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 UBE2NP1-201ENST00000545592 458 ntBASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 AC011611.1-201ENST00000552179 197 ntBASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 AC112198.2-201ENST00000426589 6996 ntBASIC4.57□□□□□ -1.68
SHANK3Q9BYB0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 SNORA54-201ENST00000384281 123 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 HIGD1AP12-201ENST00000427832 281 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 RNU6-579P-201ENST00000516879 102 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AL121594.4-201ENST00000556211 1196 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AL133457.1-201ENST00000564251 987 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AC084036.1-201ENST00000609190 508 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 AP003355.3-201ENST00000623465 114 ntBASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.56□□□□□ -1.68
SHANK3Q9BYB0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 OR5AW1P-201ENST00000426334 1006 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC096638.2-201ENST00000434965 711 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 RPL27AP5-201ENST00000469428 449 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 NPM1P29-201ENST00000483112 803 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC093755.1-201ENST00000512950 1023 ntBASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.55□□□□□ -1.68
SHANK3Q9BYB0 AC027281.1-201ENST00000574178 758 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms