Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.39■□□□□ 0.05
Ctla4P09793 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ctla4P09793 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ctla4P09793 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ctla4P09793 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Ctla4P09793 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.38■□□□□ 0.05
Ctla4P09793 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.38■□□□□ 0.05
Ctla4P09793 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.38■□□□□ 0.05
Ctla4P09793 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.38■□□□□ 0.05
Ctla4P09793 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.38■□□□□ 0.05
Ctla4P09793 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Ctla4P09793 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.38■□□□□ 0.05
Ctla4P09793 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ctla4P09793 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Ctla4P09793 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ctla4P09793 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.38■□□□□ 0.05
Ctla4P09793 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
Ctla4P09793 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ctla4P09793 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.37■□□□□ 0.05
Ctla4P09793 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.37■□□□□ 0.05
Ctla4P09793 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.37■□□□□ 0.05
Ctla4P09793 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ctla4P09793 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.37■□□□□ 0.05
Ctla4P09793 Gm27704-201ENSMUST00000185094 107 ntBASIC15.37■□□□□ 0.05
Ctla4P09793 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ctla4P09793 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Ctla4P09793 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ctla4P09793 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ctla4P09793 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.36■□□□□ 0.05
Ctla4P09793 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ctla4P09793 Gm10819-201ENSMUST00000099988 561 ntBASIC15.36■□□□□ 0.05
Ctla4P09793 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.36■□□□□ 0.05
Ctla4P09793 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ctla4P09793 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.35■□□□□ 0.05
Ctla4P09793 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ctla4P09793 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.35■□□□□ 0.05
Ctla4P09793 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ctla4P09793 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms