Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RPL23AP28-201ENST00000448062 470 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC073415.1-201ENST00000449240 153 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 MTND5P22-201ENST00000458380 195 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 RN7SL834P-201ENST00000461450 286 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 SUMO2P4-201ENST00000504193 276 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 SNX18P23-201ENST00000510867 677 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 EIF3KP3-201ENST00000514461 639 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC093816.1-201ENST00000515076 913 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 CTSLP2-201ENST00000580501 394 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 POLR3GP2-201ENST00000588366 668 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AL499605.1-201ENST00000604628 403 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AC015908.5-201ENST00000623289 343 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 AP001052.1-201ENST00000626421 99 ntBASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB9Q9Y5E1 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC092111.1-201ENST00000618256 3358 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC104162.1-201ENST00000430831 2382 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC127070.3-201ENST00000503695 3263 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC010894.1-201ENST00000313760 361 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 Y_RNA.100-201ENST00000363141 102 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 Y_RNA.395-201ENST00000383945 109 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 RNU2-39P-201ENST00000410604 198 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 RNA5SP115-201ENST00000411160 107 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 ERLEC1P1-201ENST00000433806 578 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC095057.1-201ENST00000507583 168 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC105417.1-201ENST00000514691 285 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 SCARNA24.1-201ENST00000516465 137 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 FXNP1-201ENST00000555153 337 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 SNORA70D-201ENST00000578836 135 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC100830.2-201ENST00000581636 240 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AL353997.4-201ENST00000586196 166 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 XIAPP1-201ENST00000603162 600 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC012175.1-201ENST00000603755 531 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AP001330.4-201ENST00000604350 154 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AL627309.6-201ENST00000606857 840 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 uc_338.29-201ENST00000615099 168 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC005899.7-201ENST00000618199 588 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC007792.1-201ENST00000623023 402 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC027559.1-201ENST00000636288 271 ntBASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PCDHB9Q9Y5E1 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 FANCD2P2-201ENST00000437591 1400 ntBASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 ASNSP3-201ENST00000451989 1306 ntBASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 AC010168.2-201ENST00000562691 5428 ntBASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 RNA5SP308-201ENST00000362532 115 ntBASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-574P-201ENST00000384265 107 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 394.9 ms