Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MTCO3P2-201ENST00000457365 171 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 UOX-201ENST00000471089 899 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 RN7SL216P-201ENST00000471607 298 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 RPS27P20-201ENST00000492051 246 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC005741.1-201ENST00000511094 432 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 RNA5SP318-201ENST00000516352 92 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC011853.1-201ENST00000518911 454 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC008055.1-201ENST00000547032 609 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC068831.4-201ENST00000556118 109 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 RN7SL230P-201ENST00000580835 303 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AL080274.1-201ENST00000605565 220 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AC037198.3-201ENST00000616754 526 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 U1.31-201ENST00000620022 160 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 LARP1BP1-201ENST00000506036 1359 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 TMCC1P1-201ENST00000518897 1980 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 AF287957.1-201ENST00000607368 1595 ntBASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHB9Q9Y5E1 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AL121768.1-201ENST00000613917 2544 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RN7SKP130-201ENST00000364924 301 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RNU6-996P-201ENST00000365438 107 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RNU6-639P-201ENST00000384074 107 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RNU6-1297P-201ENST00000384415 104 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC087752.1-201ENST00000391360 558 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AL078604.1-201ENST00000404609 466 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RN7SKP271-201ENST00000410528 320 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC245054.2-201ENST00000415639 319 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC079807.1-201ENST00000429993 481 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AL049734.2-201ENST00000441066 616 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 DDX3P2-201ENST00000446138 111 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 PABPC1P3-201ENST00000469174 459 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RN7SL654P-201ENST00000479178 292 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RN7SL187P-201ENST00000495587 303 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC021220.1-201ENST00000507445 630 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 IGLVIV-64-201ENST00000518581 301 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 TOMM20P1-201ENST00000534518 427 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 DPPA3P3-201ENST00000603842 430 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AC080078.3-201ENST00000605407 463 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 AL022345.1-201ENST00000607292 135 ntBASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHB9Q9Y5E1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 426.5 ms