RNA–Protein interactions for RNA: ENST00000410528.1

RN7SKP271-201, Transcript of RNA, 7SK small nuclear pseudogene 271, humanhuman

BASIC

Gene RN7SKP271, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP271-201ENST00000410528 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
RN7SKP271-201ENST00000410528 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
RN7SKP271-201ENST00000410528 ZCCHC6Q5VYS8 1495 aaKnown RBP13.05□□□□□ -0.32
RN7SKP271-201ENST00000410528 ABCC9O60706 1549 aa13.01□□□□□ -0.33
RN7SKP271-201ENST00000410528 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
RN7SKP271-201ENST00000410528 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
RN7SKP271-201ENST00000410528 NACADO15069 1562 aa12.53□□□□□ -0.4
RN7SKP271-201ENST00000410528 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
RN7SKP271-201ENST00000410528 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
RN7SKP271-201ENST00000410528 RB1CC1Q8TDY2 1594 aa12.45□□□□□ -0.42
RN7SKP271-201ENST00000410528 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
RN7SKP271-201ENST00000410528 SCRIBQ14160 1630 aa12.27□□□□□ -0.44
RN7SKP271-201ENST00000410528 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
RN7SKP271-201ENST00000410528 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
RN7SKP271-201ENST00000410528 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
RN7SKP271-201ENST00000410528 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
RN7SKP271-201ENST00000410528 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
RN7SKP271-201ENST00000410528 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.49
RN7SKP271-201ENST00000410528 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
RN7SKP271-201ENST00000410528 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
RN7SKP271-201ENST00000410528 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
RN7SKP271-201ENST00000410528 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
RN7SKP271-201ENST00000410528 PEG3Q9GZU2 1588 aa11.8□□□□□ -0.52
RN7SKP271-201ENST00000410528 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
RN7SKP271-201ENST00000410528 WIZO95785 1651 aa11.79□□□□□ -0.52
RN7SKP271-201ENST00000410528 CHIC1Q5VXU3 224 aa11.78□□□□□ -0.52
RN7SKP271-201ENST00000410528 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
RN7SKP271-201ENST00000410528 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
RN7SKP271-201ENST00000410528 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
RN7SKP271-201ENST00000410528 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
RN7SKP271-201ENST00000410528 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
RN7SKP271-201ENST00000410528 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
RN7SKP271-201ENST00000410528 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
RN7SKP271-201ENST00000410528 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
RN7SKP271-201ENST00000410528 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
RN7SKP271-201ENST00000410528 CUX2O14529 1486 aa11.39□□□□□ -0.59
RN7SKP271-201ENST00000410528 CFTRP13569 1480 aa11.33□□□□□ -0.6
RN7SKP271-201ENST00000410528 WRNQ14191 1432 aaPredicted RBP eCLIP11.33□□□□□ -0.6
RN7SKP271-201ENST00000410528 EEA1Q15075 1411 aa11.33□□□□□ -0.6
RN7SKP271-201ENST00000410528 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
RN7SKP271-201ENST00000410528 PRDM2Q13029 1718 aa11.26□□□□□ -0.61
RN7SKP271-201ENST00000410528 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
RN7SKP271-201ENST00000410528 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
RN7SKP271-201ENST00000410528 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
RN7SKP271-201ENST00000410528 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
RN7SKP271-201ENST00000410528 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
RN7SKP271-201ENST00000410528 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
RN7SKP271-201ENST00000410528 LAMC3Q9Y6N6 1575 aa11.18□□□□□ -0.62
RN7SKP271-201ENST00000410528 SOGA1O94964 1423 aa11.17□□□□□ -0.62
RN7SKP271-201ENST00000410528 NESP48681 1621 aa11.17□□□□□ -0.62
RN7SKP271-201ENST00000410528 CUX1P39880 1505 aa11.14□□□□□ -0.63
RN7SKP271-201ENST00000410528 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
RN7SKP271-201ENST00000410528 THOC2Q8NI27 1593 aaKnown RBP11.14□□□□□ -0.63
RN7SKP271-201ENST00000410528 FAM9AQ8IZU1 332 aaPredicted RBP11.13□□□□□ -0.63
RN7SKP271-201ENST00000410528 KIF21BO75037 1637 aa11.13□□□□□ -0.63
RN7SKP271-201ENST00000410528 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
RN7SKP271-201ENST00000410528 TNIKQ9UKE5 1360 aa11.11□□□□□ -0.63
RN7SKP271-201ENST00000410528 CEP164Q9UPV0 1460 aa11.1□□□□□ -0.63
RN7SKP271-201ENST00000410528 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
RN7SKP271-201ENST00000410528 GOLGA3Q08378 1498 aa11.09□□□□□ -0.63
RN7SKP271-201ENST00000410528 FANCD2Q9BXW9 1451 aa11.07□□□□□ -0.64
RN7SKP271-201ENST00000410528 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
RN7SKP271-201ENST00000410528 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
RN7SKP271-201ENST00000410528 KIF27Q86VH2 1401 aa11.04□□□□□ -0.64
RN7SKP271-201ENST00000410528 PRXQ9BXM0 1461 aa11.03□□□□□ -0.64
RN7SKP271-201ENST00000410528 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
RN7SKP271-201ENST00000410528 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
RN7SKP271-201ENST00000410528 WDR62O43379 1518 aa11□□□□□ -0.65
RN7SKP271-201ENST00000410528 FGD5Q6ZNL6 1462 aa10.99□□□□□ -0.65
RN7SKP271-201ENST00000410528 MRC2Q9UBG0 1479 aa10.99□□□□□ -0.65
RN7SKP271-201ENST00000410528 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
RN7SKP271-201ENST00000410528 ABCA10Q8WWZ4 1543 aa10.96□□□□□ -0.65
RN7SKP271-201ENST00000410528 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
RN7SKP271-201ENST00000410528 TRIM26Q12899 539 aaPredicted RBP10.95□□□□□ -0.66
RN7SKP271-201ENST00000410528 POLA1P09884 1462 aaPredicted RBP10.93□□□□□ -0.66
RN7SKP271-201ENST00000410528 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
RN7SKP271-201ENST00000410528 URB2Q14146 1524 aaKnown RBP10.93□□□□□ -0.66
RN7SKP271-201ENST00000410528 IGF1RP08069 1367 aa10.92□□□□□ -0.66
RN7SKP271-201ENST00000410528 WDR97A6NE52 1622 aa10.89□□□□□ -0.67
RN7SKP271-201ENST00000410528 CLIP1P30622 1438 aa10.89□□□□□ -0.67
RN7SKP271-201ENST00000410528 CUL7Q14999 1698 aa10.86□□□□□ -0.67
RN7SKP271-201ENST00000410528 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
RN7SKP271-201ENST00000410528 EHMT2Q96KQ7 1210 aa10.85□□□□□ -0.67
RN7SKP271-201ENST00000410528 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
RN7SKP271-201ENST00000410528 VPS8Q8N3P4 1428 aa10.84□□□□□ -0.67
RN7SKP271-201ENST00000410528 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
RN7SKP271-201ENST00000410528 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
RN7SKP271-201ENST00000410528 RAD54L2Q9Y4B4 1467 aa10.83□□□□□ -0.68
RN7SKP271-201ENST00000410528 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
RN7SKP271-201ENST00000410528 GAPVD1Q14C86 1478 aa10.79□□□□□ -0.68
RN7SKP271-201ENST00000410528 ARAP1Q96P48 1450 aa10.77□□□□□ -0.69
RN7SKP271-201ENST00000410528 IFT140Q96RY7 1462 aa10.76□□□□□ -0.69
RN7SKP271-201ENST00000410528 ARHGAP35Q9NRY4 1499 aa10.75□□□□□ -0.69
RN7SKP271-201ENST00000410528 HRCP23327 699 aa10.75□□□□□ -0.69
RN7SKP271-201ENST00000410528 EFCAB5A4FU69 1503 aa10.74□□□□□ -0.69
RN7SKP271-201ENST00000410528 MAP3K1Q13233 1512 aa10.74□□□□□ -0.69
RN7SKP271-201ENST00000410528 TDRD9Q8NDG6 1382 aaKnown RBP10.72□□□□□ -0.69
RN7SKP271-201ENST00000410528 CTTNBP2Q8WZ74 1663 aa10.71□□□□□ -0.69
RN7SKP271-201ENST00000410528 GRIN2BQ13224 1484 aa10.7□□□□□ -0.7
RN7SKP271-201ENST00000410528 FHAD1B1AJZ9 1412 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms