Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rbfox1Q9JJ43 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.02■□□□□ 0.8
Rbfox1Q9JJ43 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rbfox1Q9JJ43 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rbfox1Q9JJ43 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.96■□□□□ 0.79
Rbfox1Q9JJ43 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbfox1Q9JJ43 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbfox1Q9JJ43 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Particl-201ENSMUST00000205370 1560 ntBASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rbfox1Q9JJ43 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Rbfox1Q9JJ43 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rbfox1Q9JJ43 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rbfox1Q9JJ43 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm30023-201ENSMUST00000197970 889 ntBASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rbfox1Q9JJ43 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rbfox1Q9JJ43 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rbfox1Q9JJ43 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbfox1Q9JJ43 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rbfox1Q9JJ43 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbfox1Q9JJ43 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rbfox1Q9JJ43 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Gm45855-201ENSMUST00000212546 880 ntBASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rbfox1Q9JJ43 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rbfox1Q9JJ43 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rbfox1Q9JJ43 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rbfox1Q9JJ43 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms