Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Praf2Q9JIG8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Praf2Q9JIG8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Praf2Q9JIG8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Praf2Q9JIG8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Praf2Q9JIG8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Praf2Q9JIG8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Praf2Q9JIG8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Praf2Q9JIG8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Praf2Q9JIG8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Praf2Q9JIG8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Praf2Q9JIG8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Praf2Q9JIG8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Praf2Q9JIG8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Praf2Q9JIG8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Praf2Q9JIG8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Praf2Q9JIG8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Praf2Q9JIG8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Praf2Q9JIG8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Praf2Q9JIG8 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.85■□□□□ 0.93
Praf2Q9JIG8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Praf2Q9JIG8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Praf2Q9JIG8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Praf2Q9JIG8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Praf2Q9JIG8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Praf2Q9JIG8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Praf2Q9JIG8 Peli2-204ENSMUST00000226513 1320 ntBASIC20.83■□□□□ 0.93
Praf2Q9JIG8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.83■□□□□ 0.93
Praf2Q9JIG8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Praf2Q9JIG8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Praf2Q9JIG8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Praf2Q9JIG8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Praf2Q9JIG8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Praf2Q9JIG8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Praf2Q9JIG8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Praf2Q9JIG8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Praf2Q9JIG8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Praf2Q9JIG8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Praf2Q9JIG8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Praf2Q9JIG8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Praf2Q9JIG8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Praf2Q9JIG8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Praf2Q9JIG8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Praf2Q9JIG8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Praf2Q9JIG8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Praf2Q9JIG8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Praf2Q9JIG8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Praf2Q9JIG8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Praf2Q9JIG8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Praf2Q9JIG8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Praf2Q9JIG8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Praf2Q9JIG8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Praf2Q9JIG8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Praf2Q9JIG8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Praf2Q9JIG8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Praf2Q9JIG8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Praf2Q9JIG8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Praf2Q9JIG8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Praf2Q9JIG8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Praf2Q9JIG8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Praf2Q9JIG8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Praf2Q9JIG8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Praf2Q9JIG8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Praf2Q9JIG8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Praf2Q9JIG8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Praf2Q9JIG8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.73■□□□□ 0.91
Praf2Q9JIG8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.73■□□□□ 0.91
Praf2Q9JIG8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Praf2Q9JIG8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Praf2Q9JIG8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Praf2Q9JIG8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Praf2Q9JIG8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Praf2Q9JIG8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Praf2Q9JIG8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Praf2Q9JIG8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Praf2Q9JIG8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.71■□□□□ 0.91
Praf2Q9JIG8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Praf2Q9JIG8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Praf2Q9JIG8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Praf2Q9JIG8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Praf2Q9JIG8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.71■□□□□ 0.91
Praf2Q9JIG8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Praf2Q9JIG8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Praf2Q9JIG8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Praf2Q9JIG8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.7■□□□□ 0.9
Praf2Q9JIG8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Praf2Q9JIG8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Praf2Q9JIG8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Praf2Q9JIG8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Praf2Q9JIG8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Praf2Q9JIG8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Praf2Q9JIG8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Praf2Q9JIG8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms