Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Cldnd2Q9D9H2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd2Q9D9H2 Gm24804-201ENSMUST00000174982 85 ntBASIC20.2■□□□□ 0.82
Cldnd2Q9D9H2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldnd2Q9D9H2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldnd2Q9D9H2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd2Q9D9H2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd2Q9D9H2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd2Q9D9H2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd2Q9D9H2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd2Q9D9H2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd2Q9D9H2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cldnd2Q9D9H2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.18■□□□□ 0.82
Cldnd2Q9D9H2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd2Q9D9H2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd2Q9D9H2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.18■□□□□ 0.82
Cldnd2Q9D9H2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd2Q9D9H2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd2Q9D9H2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cldnd2Q9D9H2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd2Q9D9H2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.17■□□□□ 0.82
Cldnd2Q9D9H2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd2Q9D9H2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd2Q9D9H2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd2Q9D9H2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd2Q9D9H2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd2Q9D9H2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Cldnd2Q9D9H2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd2Q9D9H2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd2Q9D9H2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd2Q9D9H2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd2Q9D9H2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd2Q9D9H2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd2Q9D9H2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cldnd2Q9D9H2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd2Q9D9H2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd2Q9D9H2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd2Q9D9H2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd2Q9D9H2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd2Q9D9H2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Cldnd2Q9D9H2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Cldnd2Q9D9H2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.11■□□□□ 0.81
Cldnd2Q9D9H2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cldnd2Q9D9H2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd2Q9D9H2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd2Q9D9H2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd2Q9D9H2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd2Q9D9H2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cldnd2Q9D9H2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldnd2Q9D9H2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldnd2Q9D9H2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldnd2Q9D9H2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cldnd2Q9D9H2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd2Q9D9H2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.08■□□□□ 0.8
Cldnd2Q9D9H2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldnd2Q9D9H2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd2Q9D9H2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd2Q9D9H2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cldnd2Q9D9H2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd2Q9D9H2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd2Q9D9H2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Cldnd2Q9D9H2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldnd2Q9D9H2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldnd2Q9D9H2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldnd2Q9D9H2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldnd2Q9D9H2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldnd2Q9D9H2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cldnd2Q9D9H2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldnd2Q9D9H2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cldnd2Q9D9H2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldnd2Q9D9H2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldnd2Q9D9H2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldnd2Q9D9H2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldnd2Q9D9H2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldnd2Q9D9H2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldnd2Q9D9H2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldnd2Q9D9H2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldnd2Q9D9H2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldnd2Q9D9H2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cldnd2Q9D9H2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldnd2Q9D9H2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldnd2Q9D9H2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldnd2Q9D9H2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms