Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Q9CYI0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Q9CYI0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Q9CYI0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Q9CYI0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Q9CYI0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Q9CYI0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Q9CYI0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.22■■□□□ 1.79
Q9CYI0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.22■■□□□ 1.79
Q9CYI0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.21■■□□□ 1.79
Q9CYI0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.21■■□□□ 1.79
Q9CYI0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Q9CYI0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Q9CYI0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.18■■□□□ 1.78
Q9CYI0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.18■■□□□ 1.78
Q9CYI0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Q9CYI0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Q9CYI0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Q9CYI0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Q9CYI0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Q9CYI0 Particl-201ENSMUST00000205370 1560 ntBASIC26.15■■□□□ 1.78
Q9CYI0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
Q9CYI0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Q9CYI0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Q9CYI0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Q9CYI0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Q9CYI0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Q9CYI0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.12■■□□□ 1.77
Q9CYI0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Q9CYI0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Q9CYI0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Q9CYI0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Q9CYI0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Q9CYI0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Q9CYI0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Q9CYI0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Q9CYI0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Q9CYI0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Q9CYI0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Q9CYI0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Q9CYI0 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.09■■□□□ 1.77
Q9CYI0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Q9CYI0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Q9CYI0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Q9CYI0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Q9CYI0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Q9CYI0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Q9CYI0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Q9CYI0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Q9CYI0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Q9CYI0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Q9CYI0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.04■■□□□ 1.76
Q9CYI0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Q9CYI0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.03■■□□□ 1.76
Q9CYI0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Q9CYI0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
Q9CYI0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Q9CYI0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.02■■□□□ 1.76
Q9CYI0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.02■■□□□ 1.76
Q9CYI0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Q9CYI0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Q9CYI0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26■■□□□ 1.75
Q9CYI0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Q9CYI0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Q9CYI0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Q9CYI0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.97■■□□□ 1.75
Q9CYI0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Q9CYI0 Mir6538-201ENSMUST00000183713 110 ntBASIC25.96■■□□□ 1.75
Q9CYI0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Q9CYI0 Gm11175-201ENSMUST00000116172 543 ntBASIC25.95■■□□□ 1.74
Q9CYI0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Q9CYI0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Q9CYI0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Q9CYI0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Q9CYI0 Gm6311-201ENSMUST00000073790 878 ntBASIC25.94■■□□□ 1.74
Q9CYI0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.93■■□□□ 1.74
Q9CYI0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Q9CYI0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Q9CYI0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Q9CYI0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Q9CYI0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Q9CYI0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.91■■□□□ 1.74
Q9CYI0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Q9CYI0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Q9CYI0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Q9CYI0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Q9CYI0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Q9CYI0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.89■■□□□ 1.74
Q9CYI0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Q9CYI0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.87■■□□□ 1.73
Q9CYI0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Q9CYI0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.85■■□□□ 1.73
Q9CYI0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Q9CYI0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.84■■□□□ 1.73
Q9CYI0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Q9CYI0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Q9CYI0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.83■■□□□ 1.73
Q9CYI0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.82■■□□□ 1.72
Q9CYI0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Q9CYI0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms