Protein–RNA interactions for Protein: Q9CR09

Ufc1, Ubiquitin-fold modifier-conjugating enzyme 1, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufc1Q9CR09 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ufc1Q9CR09 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ufc1Q9CR09 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.36■□□□□ 0.53
Ufc1Q9CR09 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.36■□□□□ 0.53
Ufc1Q9CR09 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ufc1Q9CR09 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.36■□□□□ 0.53
Ufc1Q9CR09 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ufc1Q9CR09 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ufc1Q9CR09 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ufc1Q9CR09 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ufc1Q9CR09 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ufc1Q9CR09 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ufc1Q9CR09 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ufc1Q9CR09 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ufc1Q9CR09 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ufc1Q9CR09 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ufc1Q9CR09 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ufc1Q9CR09 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
Ufc1Q9CR09 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ufc1Q9CR09 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ufc1Q9CR09 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ufc1Q9CR09 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.32■□□□□ 0.52
Ufc1Q9CR09 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ufc1Q9CR09 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ufc1Q9CR09 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ufc1Q9CR09 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufc1Q9CR09 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.3■□□□□ 0.52
Ufc1Q9CR09 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Ufc1Q9CR09 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.3■□□□□ 0.52
Ufc1Q9CR09 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Ufc1Q9CR09 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufc1Q9CR09 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufc1Q9CR09 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.29■□□□□ 0.52
Ufc1Q9CR09 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufc1Q9CR09 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ufc1Q9CR09 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ufc1Q9CR09 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufc1Q9CR09 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufc1Q9CR09 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufc1Q9CR09 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufc1Q9CR09 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ufc1Q9CR09 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ufc1Q9CR09 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ufc1Q9CR09 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ufc1Q9CR09 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ufc1Q9CR09 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ufc1Q9CR09 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ufc1Q9CR09 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ufc1Q9CR09 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ufc1Q9CR09 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ufc1Q9CR09 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.24■□□□□ 0.51
Ufc1Q9CR09 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ufc1Q9CR09 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ufc1Q9CR09 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ufc1Q9CR09 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ufc1Q9CR09 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ufc1Q9CR09 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ufc1Q9CR09 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ufc1Q9CR09 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.5
Ufc1Q9CR09 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ufc1Q9CR09 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ufc1Q9CR09 Nkain2-201ENSMUST00000092602 558 ntBASIC18.2■□□□□ 0.5
Ufc1Q9CR09 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.19■□□□□ 0.5
Ufc1Q9CR09 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ufc1Q9CR09 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ufc1Q9CR09 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.18■□□□□ 0.5
Ufc1Q9CR09 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ufc1Q9CR09 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ufc1Q9CR09 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ufc1Q9CR09 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ufc1Q9CR09 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.17■□□□□ 0.5
Ufc1Q9CR09 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ufc1Q9CR09 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Ufc1Q9CR09 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ufc1Q9CR09 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ufc1Q9CR09 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ufc1Q9CR09 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ufc1Q9CR09 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ufc1Q9CR09 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ufc1Q9CR09 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ufc1Q9CR09 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ufc1Q9CR09 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.14■□□□□ 0.5
Ufc1Q9CR09 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ufc1Q9CR09 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ufc1Q9CR09 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms