Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.58■■□□□ 1.53
Pcdhgb1Q91XX8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.58■■□□□ 1.53
Pcdhgb1Q91XX8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Pcdhgb1Q91XX8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhgb1Q91XX8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhgb1Q91XX8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.57■■□□□ 1.52
Pcdhgb1Q91XX8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
Pcdhgb1Q91XX8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhgb1Q91XX8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhgb1Q91XX8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhgb1Q91XX8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdhgb1Q91XX8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdhgb1Q91XX8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb1Q91XX8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.54■■□□□ 1.52
Pcdhgb1Q91XX8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.54■■□□□ 1.52
Pcdhgb1Q91XX8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb1Q91XX8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb1Q91XX8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgb1Q91XX8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgb1Q91XX8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Pcdhgb1Q91XX8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Pcdhgb1Q91XX8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Pcdhgb1Q91XX8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhgb1Q91XX8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Pcdhgb1Q91XX8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhgb1Q91XX8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Pcdhgb1Q91XX8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhgb1Q91XX8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Pcdhgb1Q91XX8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.5■■□□□ 1.51
Pcdhgb1Q91XX8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhgb1Q91XX8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.49■■□□□ 1.51
Pcdhgb1Q91XX8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.49■■□□□ 1.51
Pcdhgb1Q91XX8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhgb1Q91XX8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhgb1Q91XX8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhgb1Q91XX8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhgb1Q91XX8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhgb1Q91XX8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhgb1Q91XX8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhgb1Q91XX8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Pcdhgb1Q91XX8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhgb1Q91XX8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhgb1Q91XX8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhgb1Q91XX8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
Pcdhgb1Q91XX8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.41■■□□□ 1.5
Pcdhgb1Q91XX8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhgb1Q91XX8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhgb1Q91XX8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.39■■□□□ 1.49
Pcdhgb1Q91XX8 Gm11175-201ENSMUST00000116172 543 ntBASIC24.38■■□□□ 1.49
Pcdhgb1Q91XX8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.38■■□□□ 1.49
Pcdhgb1Q91XX8 Gm6311-201ENSMUST00000073790 878 ntBASIC24.38■■□□□ 1.49
Pcdhgb1Q91XX8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgb1Q91XX8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgb1Q91XX8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhgb1Q91XX8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Pcdhgb1Q91XX8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhgb1Q91XX8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb1Q91XX8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.35■■□□□ 1.49
Pcdhgb1Q91XX8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb1Q91XX8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb1Q91XX8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhgb1Q91XX8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Pcdhgb1Q91XX8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Pcdhgb1Q91XX8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhgb1Q91XX8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Pcdhgb1Q91XX8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Pcdhgb1Q91XX8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Pcdhgb1Q91XX8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhgb1Q91XX8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgb1Q91XX8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.29■■□□□ 1.48
Pcdhgb1Q91XX8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Pcdhgb1Q91XX8 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.29■■□□□ 1.48
Pcdhgb1Q91XX8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgb1Q91XX8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Pcdhgb1Q91XX8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.27■■□□□ 1.48
Pcdhgb1Q91XX8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Gm37136-201ENSMUST00000194368 194 ntBASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgb1Q91XX8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgb1Q91XX8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgb1Q91XX8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgb1Q91XX8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgb1Q91XX8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgb1Q91XX8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgb1Q91XX8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhgb1Q91XX8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhgb1Q91XX8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhgb1Q91XX8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhgb1Q91XX8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.22■■□□□ 1.47
Pcdhgb1Q91XX8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgb1Q91XX8 Gm4799-201ENSMUST00000095396 657 ntBASIC24.22■■□□□ 1.47
Pcdhgb1Q91XX8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgb1Q91XX8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgb1Q91XX8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms