Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm25239-201ENSMUST00000174915 86 ntBASIC39.71■■■■□ 3.95
Pcdhgb1Q91XX8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
Pcdhgb1Q91XX8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Pcdhgb1Q91XX8 Gm15042-201ENSMUST00000120212 883 ntBASIC34.73■■■■□ 3.15
Pcdhgb1Q91XX8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Pcdhgb1Q91XX8 Gm24109-201ENSMUST00000175489 103 ntBASIC34.39■■■■□ 3.1
Pcdhgb1Q91XX8 Gm15045-201ENSMUST00000117359 883 ntBASIC34■■■■□ 3.03
Pcdhgb1Q91XX8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Pcdhgb1Q91XX8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Pcdhgb1Q91XX8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Pcdhgb1Q91XX8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
Pcdhgb1Q91XX8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Pcdhgb1Q91XX8 Gm23366-201ENSMUST00000175022 89 ntBASIC33.14■■■□□ 2.9
Pcdhgb1Q91XX8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Pcdhgb1Q91XX8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Pcdhgb1Q91XX8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Pcdhgb1Q91XX8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.31■■■□□ 2.76
Pcdhgb1Q91XX8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pcdhgb1Q91XX8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.08■■■□□ 2.73
Pcdhgb1Q91XX8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pcdhgb1Q91XX8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Pcdhgb1Q91XX8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.9■■■□□ 2.7
Pcdhgb1Q91XX8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pcdhgb1Q91XX8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pcdhgb1Q91XX8 Psd-208ENSMUST00000224556 2034 ntBASIC31.78■■■□□ 2.68
Pcdhgb1Q91XX8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Pcdhgb1Q91XX8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pcdhgb1Q91XX8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pcdhgb1Q91XX8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.68■■■□□ 2.66
Pcdhgb1Q91XX8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.57■■■□□ 2.65
Pcdhgb1Q91XX8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pcdhgb1Q91XX8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pcdhgb1Q91XX8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcdhgb1Q91XX8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcdhgb1Q91XX8 Gm25238-201ENSMUST00000174914 89 ntBASIC31.35■■■□□ 2.61
Pcdhgb1Q91XX8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.25■■■□□ 2.59
Pcdhgb1Q91XX8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pcdhgb1Q91XX8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pcdhgb1Q91XX8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.03■■■□□ 2.56
Pcdhgb1Q91XX8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Pcdhgb1Q91XX8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Pcdhgb1Q91XX8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Pcdhgb1Q91XX8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Pcdhgb1Q91XX8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcdhgb1Q91XX8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
Pcdhgb1Q91XX8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.57■■■□□ 2.48
Pcdhgb1Q91XX8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pcdhgb1Q91XX8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Pcdhgb1Q91XX8 Gm27325-201ENSMUST00000175467 74 ntBASIC30.45■■■□□ 2.47
Pcdhgb1Q91XX8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Pcdhgb1Q91XX8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.41■■■□□ 2.46
Pcdhgb1Q91XX8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pcdhgb1Q91XX8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.3■■■□□ 2.44
Pcdhgb1Q91XX8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.28■■■□□ 2.44
Pcdhgb1Q91XX8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Pcdhgb1Q91XX8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
Pcdhgb1Q91XX8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.19■■■□□ 2.42
Pcdhgb1Q91XX8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.08■■■□□ 2.41
Pcdhgb1Q91XX8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pcdhgb1Q91XX8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pcdhgb1Q91XX8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcdhgb1Q91XX8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Pcdhgb1Q91XX8 Gm25262-201ENSMUST00000174934 133 ntBASIC29.95■■■□□ 2.39
Pcdhgb1Q91XX8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Pcdhgb1Q91XX8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.85■■■□□ 2.37
Pcdhgb1Q91XX8 Rab21-202ENSMUST00000218831 843 ntBASIC29.84■■■□□ 2.37
Pcdhgb1Q91XX8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pcdhgb1Q91XX8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Pcdhgb1Q91XX8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.74■■■□□ 2.35
Pcdhgb1Q91XX8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdhgb1Q91XX8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Pcdhgb1Q91XX8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Pcdhgb1Q91XX8 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.65■■■□□ 2.34
Pcdhgb1Q91XX8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pcdhgb1Q91XX8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Pcdhgb1Q91XX8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.6■■■□□ 2.33
Pcdhgb1Q91XX8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Pcdhgb1Q91XX8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pcdhgb1Q91XX8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pcdhgb1Q91XX8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Pcdhgb1Q91XX8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pcdhgb1Q91XX8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.52■■■□□ 2.32
Pcdhgb1Q91XX8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pcdhgb1Q91XX8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Pcdhgb1Q91XX8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Pcdhgb1Q91XX8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.39■■■□□ 2.3
Pcdhgb1Q91XX8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.39■■■□□ 2.3
Pcdhgb1Q91XX8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Pcdhgb1Q91XX8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.37■■■□□ 2.29
Pcdhgb1Q91XX8 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.37■■■□□ 2.29
Pcdhgb1Q91XX8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Pcdhgb1Q91XX8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Pcdhgb1Q91XX8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Pcdhgb1Q91XX8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pcdhgb1Q91XX8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.25■■■□□ 2.27
Pcdhgb1Q91XX8 Gm26115-201ENSMUST00000175605 87 ntBASIC29.17■■■□□ 2.26
Pcdhgb1Q91XX8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdhgb1Q91XX8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdhgb1Q91XX8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pcdhgb1Q91XX8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms