Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx1Q91VR5 Gm11599-201ENSMUST00000118720 878 ntBASIC24.5■■□□□ 1.51
Ddx1Q91VR5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.5■■□□□ 1.51
Ddx1Q91VR5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx1Q91VR5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx1Q91VR5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx1Q91VR5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Ddx1Q91VR5 Gm30023-201ENSMUST00000197970 889 ntBASIC24.49■■□□□ 1.51
Ddx1Q91VR5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx1Q91VR5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx1Q91VR5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx1Q91VR5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
Ddx1Q91VR5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx1Q91VR5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx1Q91VR5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx1Q91VR5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.46■■□□□ 1.51
Ddx1Q91VR5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx1Q91VR5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Ddx1Q91VR5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx1Q91VR5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Ddx1Q91VR5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ddx1Q91VR5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.45■■□□□ 1.5
Ddx1Q91VR5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.45■■□□□ 1.5
Ddx1Q91VR5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx1Q91VR5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.44■■□□□ 1.5
Ddx1Q91VR5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.44■■□□□ 1.5
Ddx1Q91VR5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx1Q91VR5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ddx1Q91VR5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Ddx1Q91VR5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx1Q91VR5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.43■■□□□ 1.5
Ddx1Q91VR5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.42■■□□□ 1.5
Ddx1Q91VR5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx1Q91VR5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx1Q91VR5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx1Q91VR5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Ddx1Q91VR5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx1Q91VR5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx1Q91VR5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.39■■□□□ 1.49
Ddx1Q91VR5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.39■■□□□ 1.49
Ddx1Q91VR5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Ddx1Q91VR5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx1Q91VR5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx1Q91VR5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx1Q91VR5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Ddx1Q91VR5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx1Q91VR5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx1Q91VR5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.36■■□□□ 1.49
Ddx1Q91VR5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx1Q91VR5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx1Q91VR5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx1Q91VR5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx1Q91VR5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.35■■□□□ 1.49
Ddx1Q91VR5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx1Q91VR5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx1Q91VR5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx1Q91VR5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Ddx1Q91VR5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx1Q91VR5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.32■■□□□ 1.48
Ddx1Q91VR5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx1Q91VR5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ddx1Q91VR5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
Ddx1Q91VR5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx1Q91VR5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx1Q91VR5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx1Q91VR5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx1Q91VR5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx1Q91VR5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Ddx1Q91VR5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx1Q91VR5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Ddx1Q91VR5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
Ddx1Q91VR5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.28■■□□□ 1.48
Ddx1Q91VR5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx1Q91VR5 Cap2-205ENSMUST00000225824 1634 ntBASIC24.28■■□□□ 1.48
Ddx1Q91VR5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ddx1Q91VR5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.26■■□□□ 1.47
Ddx1Q91VR5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ddx1Q91VR5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx1Q91VR5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Ddx1Q91VR5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx1Q91VR5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx1Q91VR5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx1Q91VR5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx1Q91VR5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx1Q91VR5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Ddx1Q91VR5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx1Q91VR5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.22■■□□□ 1.47
Ddx1Q91VR5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.22■■□□□ 1.47
Ddx1Q91VR5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.22■■□□□ 1.47
Ddx1Q91VR5 Gm11175-201ENSMUST00000116172 543 ntBASIC24.21■■□□□ 1.47
Ddx1Q91VR5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx1Q91VR5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Ddx1Q91VR5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms