Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh18Q8VHR0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh18Q8VHR0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh18Q8VHR0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdh18Q8VHR0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh18Q8VHR0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh18Q8VHR0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh18Q8VHR0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh18Q8VHR0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh18Q8VHR0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh18Q8VHR0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh18Q8VHR0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh18Q8VHR0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Pcdh18Q8VHR0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh18Q8VHR0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh18Q8VHR0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh18Q8VHR0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.46■■□□□ 1.19
Pcdh18Q8VHR0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh18Q8VHR0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh18Q8VHR0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh18Q8VHR0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdh18Q8VHR0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh18Q8VHR0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pcdh18Q8VHR0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh18Q8VHR0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh18Q8VHR0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh18Q8VHR0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh18Q8VHR0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh18Q8VHR0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh18Q8VHR0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh18Q8VHR0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Pcdh18Q8VHR0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdh18Q8VHR0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh18Q8VHR0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh18Q8VHR0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdh18Q8VHR0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh18Q8VHR0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh18Q8VHR0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh18Q8VHR0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh18Q8VHR0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdh18Q8VHR0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh18Q8VHR0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdh18Q8VHR0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdh18Q8VHR0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh18Q8VHR0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh18Q8VHR0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdh18Q8VHR0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh18Q8VHR0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh18Q8VHR0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.36■■□□□ 1.17
Pcdh18Q8VHR0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdh18Q8VHR0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh18Q8VHR0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh18Q8VHR0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh18Q8VHR0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh18Q8VHR0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh18Q8VHR0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh18Q8VHR0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh18Q8VHR0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh18Q8VHR0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh18Q8VHR0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh18Q8VHR0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh18Q8VHR0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh18Q8VHR0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh18Q8VHR0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdh18Q8VHR0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh18Q8VHR0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh18Q8VHR0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh18Q8VHR0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdh18Q8VHR0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh18Q8VHR0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.3■■□□□ 1.16
Pcdh18Q8VHR0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh18Q8VHR0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh18Q8VHR0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh18Q8VHR0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh18Q8VHR0 Zfp131-205ENSMUST00000223812 663 ntBASIC22.28■■□□□ 1.16
Pcdh18Q8VHR0 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.28■■□□□ 1.16
Pcdh18Q8VHR0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh18Q8VHR0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh18Q8VHR0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh18Q8VHR0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh18Q8VHR0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
Pcdh18Q8VHR0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh18Q8VHR0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh18Q8VHR0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh18Q8VHR0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Pcdh18Q8VHR0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh18Q8VHR0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh18Q8VHR0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh18Q8VHR0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pcdh18Q8VHR0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh18Q8VHR0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Pcdh18Q8VHR0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh18Q8VHR0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms