Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
Cdt1Q8R4E9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cdt1Q8R4E9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cdt1Q8R4E9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cdt1Q8R4E9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.74■■□□□ 1.23
Cdt1Q8R4E9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Cdt1Q8R4E9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cdt1Q8R4E9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Cdt1Q8R4E9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cdt1Q8R4E9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.71■■□□□ 1.23
Cdt1Q8R4E9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Cdt1Q8R4E9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cdt1Q8R4E9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cdt1Q8R4E9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Cdt1Q8R4E9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cdt1Q8R4E9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.7■■□□□ 1.22
Cdt1Q8R4E9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cdt1Q8R4E9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cdt1Q8R4E9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cdt1Q8R4E9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cdt1Q8R4E9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdt1Q8R4E9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cdt1Q8R4E9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.69■■□□□ 1.22
Cdt1Q8R4E9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdt1Q8R4E9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.68■■□□□ 1.22
Cdt1Q8R4E9 Cap2-205ENSMUST00000225824 1634 ntBASIC22.68■■□□□ 1.22
Cdt1Q8R4E9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.67■■□□□ 1.22
Cdt1Q8R4E9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Cdt1Q8R4E9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cdt1Q8R4E9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Cdt1Q8R4E9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdt1Q8R4E9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdt1Q8R4E9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
Cdt1Q8R4E9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Cdt1Q8R4E9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.66■■□□□ 1.22
Cdt1Q8R4E9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Cdt1Q8R4E9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Cdt1Q8R4E9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Cdt1Q8R4E9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cdt1Q8R4E9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.62■■□□□ 1.21
Cdt1Q8R4E9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.62■■□□□ 1.21
Cdt1Q8R4E9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.62■■□□□ 1.21
Cdt1Q8R4E9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdt1Q8R4E9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.61■■□□□ 1.21
Cdt1Q8R4E9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cdt1Q8R4E9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cdt1Q8R4E9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.6■■□□□ 1.21
Cdt1Q8R4E9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdt1Q8R4E9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cdt1Q8R4E9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.58■■□□□ 1.21
Cdt1Q8R4E9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cdt1Q8R4E9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.58■■□□□ 1.21
Cdt1Q8R4E9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Cdt1Q8R4E9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.57■■□□□ 1.2
Cdt1Q8R4E9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdt1Q8R4E9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Cdt1Q8R4E9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cdt1Q8R4E9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdt1Q8R4E9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdt1Q8R4E9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdt1Q8R4E9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.55■■□□□ 1.2
Cdt1Q8R4E9 Gm30023-201ENSMUST00000197970 889 ntBASIC22.55■■□□□ 1.2
Cdt1Q8R4E9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdt1Q8R4E9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cdt1Q8R4E9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdt1Q8R4E9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.53■■□□□ 1.2
Cdt1Q8R4E9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Cdt1Q8R4E9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.52■■□□□ 1.2
Cdt1Q8R4E9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cdt1Q8R4E9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Cdt1Q8R4E9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Cdt1Q8R4E9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cdt1Q8R4E9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cdt1Q8R4E9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cdt1Q8R4E9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cdt1Q8R4E9 Gm6311-201ENSMUST00000073790 878 ntBASIC22.49■■□□□ 1.19
Cdt1Q8R4E9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cdt1Q8R4E9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Cdt1Q8R4E9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cdt1Q8R4E9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
Cdt1Q8R4E9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cdt1Q8R4E9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cdt1Q8R4E9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cdt1Q8R4E9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.47■■□□□ 1.19
Cdt1Q8R4E9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cdt1Q8R4E9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdt1Q8R4E9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdt1Q8R4E9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdt1Q8R4E9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Cdt1Q8R4E9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdt1Q8R4E9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdt1Q8R4E9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.46■■□□□ 1.19
Cdt1Q8R4E9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdt1Q8R4E9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Cdt1Q8R4E9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Cdt1Q8R4E9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cdt1Q8R4E9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Cdt1Q8R4E9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Cdt1Q8R4E9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cdt1Q8R4E9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms