Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.65■□□□□ 0.74
Smim4Q8C1Q6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.65■□□□□ 0.74
Smim4Q8C1Q6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Smim4Q8C1Q6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smim4Q8C1Q6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim4Q8C1Q6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim4Q8C1Q6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Gm45855-201ENSMUST00000212546 880 ntBASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smim4Q8C1Q6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim4Q8C1Q6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim4Q8C1Q6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Smim4Q8C1Q6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.57■□□□□ 0.72
Smim4Q8C1Q6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Smim4Q8C1Q6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smim4Q8C1Q6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smim4Q8C1Q6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smim4Q8C1Q6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smim4Q8C1Q6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Gm30023-201ENSMUST00000197970 889 ntBASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim4Q8C1Q6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.45■□□□□ 0.7
Smim4Q8C1Q6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim4Q8C1Q6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.43■□□□□ 0.7
Smim4Q8C1Q6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim4Q8C1Q6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms