Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.65■□□□□ 0.74
Smim4Q8C1Q6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.65■□□□□ 0.74
Smim4Q8C1Q6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Smim4Q8C1Q6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smim4Q8C1Q6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim4Q8C1Q6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim4Q8C1Q6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Gm45855-201ENSMUST00000212546 880 ntBASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim4Q8C1Q6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim4Q8C1Q6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smim4Q8C1Q6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim4Q8C1Q6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim4Q8C1Q6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim4Q8C1Q6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Smim4Q8C1Q6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.57■□□□□ 0.72
Smim4Q8C1Q6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim4Q8C1Q6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Smim4Q8C1Q6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smim4Q8C1Q6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.54■□□□□ 0.72
Smim4Q8C1Q6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smim4Q8C1Q6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smim4Q8C1Q6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smim4Q8C1Q6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim4Q8C1Q6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smim4Q8C1Q6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smim4Q8C1Q6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Smim4Q8C1Q6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smim4Q8C1Q6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Gm30023-201ENSMUST00000197970 889 ntBASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim4Q8C1Q6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim4Q8C1Q6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.45■□□□□ 0.7
Smim4Q8C1Q6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim4Q8C1Q6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim4Q8C1Q6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.43■□□□□ 0.7
Smim4Q8C1Q6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim4Q8C1Q6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim4Q8C1Q6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms