Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zic4Q61467 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Zic4Q61467 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Zic4Q61467 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zic4Q61467 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.22■□□□□ 0.67
Zic4Q61467 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zic4Q61467 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zic4Q61467 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zic4Q61467 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zic4Q61467 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zic4Q61467 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zic4Q61467 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zic4Q61467 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zic4Q61467 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zic4Q61467 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zic4Q61467 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zic4Q61467 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.2■□□□□ 0.66
Zic4Q61467 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zic4Q61467 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zic4Q61467 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zic4Q61467 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zic4Q61467 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zic4Q61467 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Zic4Q61467 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zic4Q61467 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zic4Q61467 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zic4Q61467 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.16■□□□□ 0.66
Zic4Q61467 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Zic4Q61467 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zic4Q61467 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zic4Q61467 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Zic4Q61467 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zic4Q61467 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic4Q61467 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Zic4Q61467 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic4Q61467 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic4Q61467 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic4Q61467 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zic4Q61467 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Zic4Q61467 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zic4Q61467 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zic4Q61467 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zic4Q61467 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Zic4Q61467 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Zic4Q61467 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zic4Q61467 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zic4Q61467 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zic4Q61467 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zic4Q61467 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Zic4Q61467 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.12■□□□□ 0.65
Zic4Q61467 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Zic4Q61467 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.12■□□□□ 0.65
Zic4Q61467 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zic4Q61467 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.11■□□□□ 0.65
Zic4Q61467 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Zic4Q61467 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zic4Q61467 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zic4Q61467 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zic4Q61467 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Zic4Q61467 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Zic4Q61467 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zic4Q61467 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zic4Q61467 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zic4Q61467 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.09■□□□□ 0.65
Zic4Q61467 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zic4Q61467 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zic4Q61467 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zic4Q61467 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Zic4Q61467 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.08■□□□□ 0.64
Zic4Q61467 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Zic4Q61467 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Zic4Q61467 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zic4Q61467 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zic4Q61467 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.07■□□□□ 0.64
Zic4Q61467 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zic4Q61467 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zic4Q61467 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zic4Q61467 Gm26115-201ENSMUST00000175605 87 ntBASIC19.06■□□□□ 0.64
Zic4Q61467 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zic4Q61467 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Zic4Q61467 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic4Q61467 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic4Q61467 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic4Q61467 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic4Q61467 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic4Q61467 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Zic4Q61467 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zic4Q61467 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zic4Q61467 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Zic4Q61467 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zic4Q61467 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Zic4Q61467 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.03■□□□□ 0.64
Zic4Q61467 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zic4Q61467 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Zic4Q61467 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Zic4Q61467 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Zic4Q61467 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Zic4Q61467 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zic4Q61467 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms