Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15-1-dv6-1Q5R1D2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.2■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Gm8109-201ENSMUST00000194076 746 ntBASIC18.2■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trav15-1-dv6-1Q5R1D2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.14■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Gm16148-201ENSMUST00000119653 893 ntBASIC18.1■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav15-1-dv6-1Q5R1D2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.08■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms