Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 LYS20YDL182W 1287 nt5.67□□□□□ -1.5
SMD1Q02260 snR4snR4 186 nt5.67□□□□□ -1.5
SMD1Q02260 POP2YNR052C 1302 nt5.67□□□□□ -1.5
SMD1Q02260 YNL040WYNL040W 1371 nt5.67□□□□□ -1.5
SMD1Q02260 THP3YPR045C 1413 nt5.66□□□□□ -1.5
SMD1Q02260 NIF3YGL221C 867 nt5.66□□□□□ -1.5
SMD1Q02260 AIM34YMR003W 597 nt5.66□□□□□ -1.5
SMD1Q02260 DAL7YIR031C 1665 nt5.66□□□□□ -1.5
SMD1Q02260 YBR056WYBR056W 1506 nt5.65□□□□□ -1.5
SMD1Q02260 RSM7YJR113C 744 nt5.65□□□□□ -1.5
SMD1Q02260 TIF3YPR163C 1311 nt5.65□□□□□ -1.51
SMD1Q02260 ABP1YCR088W 1779 nt5.63□□□□□ -1.51
SMD1Q02260 NAS6YGR232W 687 nt5.63□□□□□ -1.51
SMD1Q02260 YJL009WYJL009W 327 nt5.63□□□□□ -1.51
SMD1Q02260 BUB2YMR055C 921 nt5.63□□□□□ -1.51
SMD1Q02260 FTH1YBR207W 1398 nt5.63□□□□□ -1.51
SMD1Q02260 NMD5YJR132W 3147 nt5.62□□□□□ -1.51
SMD1Q02260 NDE2YDL085W 1638 nt5.62□□□□□ -1.51
SMD1Q02260 CDC13YDL220C 2775 nt5.61□□□□□ -1.51
SMD1Q02260 ASN2YGR124W 1719 nt5.61□□□□□ -1.51
SMD1Q02260 PFS2YNL317W 1398 nt5.61□□□□□ -1.51
SMD1Q02260 CIR2YOR356W 1896 nt5.61□□□□□ -1.51
SMD1Q02260 YOS9YDR057W 1629 nt5.6□□□□□ -1.51
SMD1Q02260 SDS24YBR214W 1584 nt5.6□□□□□ -1.51
SMD1Q02260 MAS2YHR024C 1449 nt5.6□□□□□ -1.51
SMD1Q02260 GLY1YEL046C 1164 nt5.6□□□□□ -1.51
SMD1Q02260 TDA4YJR116W 840 nt5.6□□□□□ -1.51
SMD1Q02260 YNL140CYNL140C 570 nt5.6□□□□□ -1.51
SMD1Q02260 ATO2YNR002C 849 nt5.6□□□□□ -1.51
SMD1Q02260 YEN1YER041W 2280 nt5.6□□□□□ -1.51
SMD1Q02260 TOS2YGR221C 1869 nt5.6□□□□□ -1.51
SMD1Q02260 ADE17YMR120C 1779 nt5.6□□□□□ -1.51
SMD1Q02260 PRP2YNR011C 2631 nt5.6□□□□□ -1.51
SMD1Q02260 VBA3YCL069W 1377 nt5.59□□□□□ -1.51
SMD1Q02260 BUD31YCR063W 474 nt5.59□□□□□ -1.51
SMD1Q02260 SLM3YDL033C 1254 nt5.59□□□□□ -1.51
SMD1Q02260 YFR020WYFR020W 699 nt5.59□□□□□ -1.51
SMD1Q02260 KRE1YNL322C 942 nt5.59□□□□□ -1.51
SMD1Q02260 SPE2YOL052C 1191 nt5.59□□□□□ -1.51
SMD1Q02260 ITR1YDR497C 1755 nt5.59□□□□□ -1.51
SMD1Q02260 ATP10YLR393W 840 nt5.58□□□□□ -1.52
SMD1Q02260 MDH2YOL126C 1134 nt5.58□□□□□ -1.52
SMD1Q02260 TGL5YOR081C 2250 nt5.58□□□□□ -1.52
SMD1Q02260 HSM3YBR272C 1443 nt5.57□□□□□ -1.52
SMD1Q02260 YER152CYER152C 1332 nt5.57□□□□□ -1.52
SMD1Q02260 YHR131CYHR131C 2553 nt5.57□□□□□ -1.52
SMD1Q02260 CHA1YCL064C 1083 nt5.57□□□□□ -1.52
SMD1Q02260 INM1YHR046C 888 nt5.57□□□□□ -1.52
SMD1Q02260 APS2YJR058C 444 nt5.57□□□□□ -1.52
SMD1Q02260 YKR012CYKR012C 378 nt5.57□□□□□ -1.52
SMD1Q02260 YLR460CYLR460C 1131 nt5.57□□□□□ -1.52
SMD1Q02260 CPD1YGR247W 720 nt5.56□□□□□ -1.52
SMD1Q02260 YJR149WYJR149W 1215 nt5.56□□□□□ -1.52
SMD1Q02260 ENO1YGR254W 1314 nt5.55□□□□□ -1.52
SMD1Q02260 PMT7YDR307W 1989 nt5.55□□□□□ -1.52
SMD1Q02260 YEL034C-AYEL034C-A 603 nt5.55□□□□□ -1.52
SMD1Q02260 NAS2YIL007C 663 nt5.55□□□□□ -1.52
SMD1Q02260 STE4YOR212W 1272 nt5.55□□□□□ -1.52
SMD1Q02260 FCP1YMR277W 2199 nt5.55□□□□□ -1.52
SMD1Q02260 EHT1YBR177C 1356 nt5.55□□□□□ -1.52
SMD1Q02260 YIP4YGL198W 708 nt5.54□□□□□ -1.52
SMD1Q02260 CHS7YHR142W 951 nt5.54□□□□□ -1.52
SMD1Q02260 CDD1YLR245C 429 nt5.54□□□□□ -1.52
SMD1Q02260 WSC3YOL105C 1671 nt5.53□□□□□ -1.52
SMD1Q02260 MRN1YPL184C 1839 nt5.53□□□□□ -1.52
SMD1Q02260 RPL2AYFR031C-A 765 nt5.53□□□□□ -1.52
SMD1Q02260 YGR137WYGR137W 375 nt5.53□□□□□ -1.52
SMD1Q02260 LRO1YNR008W 1986 nt5.53□□□□□ -1.52
SMD1Q02260 MEP1YGR121C 1479 nt5.52□□□□□ -1.53
SMD1Q02260 OLA1YBR025C 1185 nt5.52□□□□□ -1.53
SMD1Q02260 IGD1YFR017C 588 nt5.51□□□□□ -1.53
SMD1Q02260 PHB2YGR231C 933 nt5.51□□□□□ -1.53
SMD1Q02260 YLR349WYLR349W 507 nt5.51□□□□□ -1.53
SMD1Q02260 STP3YLR375W 1032 nt5.51□□□□□ -1.53
SMD1Q02260 INO1YJL153C 1602 nt5.51□□□□□ -1.53
SMD1Q02260 KTR4YBR199W 1395 nt5.51□□□□□ -1.53
SMD1Q02260 DIP5YPL265W 1827 nt5.51□□□□□ -1.53
SMD1Q02260 SRP102YKL154W 735 nt5.5□□□□□ -1.53
SMD1Q02260 RCF1YML030W 480 nt5.5□□□□□ -1.53
SMD1Q02260 HSV2YGR223C 1347 nt5.49□□□□□ -1.53
SMD1Q02260 MET22YOL064C 1074 nt5.49□□□□□ -1.53
SMD1Q02260 UBP13YBL067C 2244 nt5.49□□□□□ -1.53
SMD1Q02260 PDC6YGR087C 1692 nt5.49□□□□□ -1.53
SMD1Q02260 MLS1YNL117W 1665 nt5.49□□□□□ -1.53
SMD1Q02260 PRC1YMR297W 1599 nt5.48□□□□□ -1.53
SMD1Q02260 BIM1YER016W 1035 nt5.48□□□□□ -1.53
SMD1Q02260 RNA170RNA170 169 nt5.48□□□□□ -1.53
SMD1Q02260 ADH3YMR083W 1128 nt5.48□□□□□ -1.53
SMD1Q02260 MET13YGL125W 1803 nt5.48□□□□□ -1.53
SMD1Q02260 SGE1YPR198W 1632 nt5.48□□□□□ -1.53
SMD1Q02260 CBK1YNL161W 2271 nt5.48□□□□□ -1.53
SMD1Q02260 EDC3YEL015W 1656 nt5.47□□□□□ -1.53
SMD1Q02260 WSC4YHL028W 1818 nt5.47□□□□□ -1.53
SMD1Q02260 CYC3YAL039C 810 nt5.47□□□□□ -1.53
SMD1Q02260 ACO1YLR304C 2337 nt5.46□□□□□ -1.54
SMD1Q02260 MOB1YIL106W 945 nt5.46□□□□□ -1.54
SMD1Q02260 DPH5YLR172C 903 nt5.46□□□□□ -1.54
SMD1Q02260 YMR253CYMR253C 1245 nt5.46□□□□□ -1.54
SMD1Q02260 ERR3YMR323W 1314 nt5.46□□□□□ -1.54
SMD1Q02260 ERR1YOR393W 1314 nt5.46□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms