Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 MRP1YDR347W 966 nt9.1□□□□□ -0.95
HDA1P53973 ELP4YPL101W 1371 nt9.1□□□□□ -0.95
HDA1P53973 RPL12BYDR418W 498 nt9.09□□□□□ -0.95
HDA1P53973 YIR035CYIR035C 765 nt9.09□□□□□ -0.95
HDA1P53973 BUB2YMR055C 921 nt9.09□□□□□ -0.95
HDA1P53973 OLA1YBR025C 1185 nt9.09□□□□□ -0.95
HDA1P53973 RHO1YPR165W 630 nt9.09□□□□□ -0.95
HDA1P53973 MFT1YML062C 1179 nt9.08□□□□□ -0.96
HDA1P53973 ATP2YJR121W 1536 nt9.08□□□□□ -0.96
HDA1P53973 GDH1YOR375C 1365 nt9.08□□□□□ -0.96
HDA1P53973 KAE1YKR038C 1161 nt9.07□□□□□ -0.96
HDA1P53973 MET2YNL277W 1461 nt9.07□□□□□ -0.96
HDA1P53973 TRP2YER090W 1524 nt9.06□□□□□ -0.96
HDA1P53973 YJL009WYJL009W 327 nt9.06□□□□□ -0.96
HDA1P53973 CYT1YOR065W 930 nt9.06□□□□□ -0.96
HDA1P53973 LRO1YNR008W 1986 nt9.06□□□□□ -0.96
HDA1P53973 MAE1YKL029C 2010 nt9.05□□□□□ -0.96
HDA1P53973 THI73YLR004C 1572 nt9.04□□□□□ -0.96
HDA1P53973 YAL016C-AYAL016C-A 315 nt9.04□□□□□ -0.96
HDA1P53973 HXT8YJL214W 1710 nt9.03□□□□□ -0.96
HDA1P53973 THI6YPL214C 1623 nt9.03□□□□□ -0.96
HDA1P53973 TAD2YJL035C 753 nt9.03□□□□□ -0.96
HDA1P53973 EHT1YBR177C 1356 nt9.02□□□□□ -0.97
HDA1P53973 PUP3YER094C 618 nt9.02□□□□□ -0.97
HDA1P53973 YIL168WYIL168W 384 nt9.02□□□□□ -0.97
HDA1P53973 TPO4YOR273C 1980 nt9.02□□□□□ -0.97
HDA1P53973 ADE1YAR015W 921 nt9.01□□□□□ -0.97
HDA1P53973 HXT11YOL156W 1704 nt9.01□□□□□ -0.97
HDA1P53973 YOR268CYOR268C 399 nt9.01□□□□□ -0.97
HDA1P53973 ABP1YCR088W 1779 nt9.01□□□□□ -0.97
HDA1P53973 ARO7YPR060C 771 nt9□□□□□ -0.97
HDA1P53973 JHD1YER051W 1479 nt9□□□□□ -0.97
HDA1P53973 TOS1YBR162C 1368 nt8.99□□□□□ -0.97
HDA1P53973 YPT31YER031C 672 nt8.99□□□□□ -0.97
HDA1P53973 YPR084WYPR084W 1371 nt8.99□□□□□ -0.97
HDA1P53973 SRM1YGL097W 1449 nt8.97□□□□□ -0.97
HDA1P53973 DIP5YPL265W 1827 nt8.96□□□□□ -0.97
HDA1P53973 TDH1YJL052W 999 nt8.96□□□□□ -0.98
HDA1P53973 YMR206WYMR206W 942 nt8.95□□□□□ -0.98
HDA1P53973 MFG1YDL233W 1377 nt8.95□□□□□ -0.98
HDA1P53973 TIM50YPL063W 1431 nt8.95□□□□□ -0.98
HDA1P53973 NBA1YOL070C 1506 nt8.95□□□□□ -0.98
HDA1P53973 YJL043WYJL043W 774 nt8.93□□□□□ -0.98
HDA1P53973 ESBP6YNL125C 2022 nt8.92□□□□□ -0.98
HDA1P53973 EDC2YER035W 438 nt8.92□□□□□ -0.98
HDA1P53973 NUP53YMR153W 1428 nt8.91□□□□□ -0.98
HDA1P53973 YHL030W-AYHL030W-A 462 nt8.91□□□□□ -0.98
HDA1P53973 YHL008CYHL008C 1884 nt8.9□□□□□ -0.98
HDA1P53973 HIS3YOR202W 663 nt8.9□□□□□ -0.98
HDA1P53973 INO1YJL153C 1602 nt8.9□□□□□ -0.99
HDA1P53973 LEA1YPL213W 717 nt8.89□□□□□ -0.99
HDA1P53973 NPP1YCR026C 2229 nt8.88□□□□□ -0.99
HDA1P53973 ARO3YDR035W 1113 nt8.88□□□□□ -0.99
HDA1P53973 NCA3YJL116C 1014 nt8.88□□□□□ -0.99
HDA1P53973 BUD31YCR063W 474 nt8.87□□□□□ -0.99
HDA1P53973 FUS3YBL016W 1062 nt8.87□□□□□ -0.99
HDA1P53973 WSC4YHL028W 1818 nt8.87□□□□□ -0.99
HDA1P53973 FTH1YBR207W 1398 nt8.86□□□□□ -0.99
HDA1P53973 ALG7YBR243C 1347 nt8.86□□□□□ -0.99
HDA1P53973 PAB1YER165W 1734 nt8.86□□□□□ -0.99
HDA1P53973 HAC1YFL031W 717 nt8.86□□□□□ -0.99
HDA1P53973 APT1YML022W 564 nt8.86□□□□□ -0.99
HDA1P53973 PRE10YOR362C 867 nt8.86□□□□□ -0.99
HDA1P53973 MRN1YPL184C 1839 nt8.86□□□□□ -0.99
HDA1P53973 ILV2YMR108W 2064 nt8.85□□□□□ -0.99
HDA1P53973 SFP1YLR403W 2052 nt8.84□□□□□ -0.99
HDA1P53973 RRT6YGL146C 936 nt8.84□□□□□ -0.99
HDA1P53973 RCF1YML030W 480 nt8.84□□□□□ -0.99
HDA1P53973 PET494YNR045W 1470 nt8.83□□□□□ -1
HDA1P53973 HOG1YLR113W 1308 nt8.82□□□□□ -1
HDA1P53973 PSP2YML017W 1782 nt8.82□□□□□ -1
HDA1P53973 YEL009C-AYEL009C-A 408 nt8.82□□□□□ -1
HDA1P53973 DTR1YBR180W 1719 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)BtD(GUC)B 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)DtD(GUC)D 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)G1tD(GUC)G1 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)G2tD(GUC)G2 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)I1tD(GUC)I1 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)I2tD(GUC)I2 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)J1tD(GUC)J1 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)J2tD(GUC)J2 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)J3tD(GUC)J3 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)J4tD(GUC)J4 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)KtD(GUC)K 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)L1tD(GUC)L1 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)L2tD(GUC)L2 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)MtD(GUC)M 72 nt8.8□□□□□ -1
HDA1P53973 tD(GUC)OtD(GUC)O 72 nt8.8□□□□□ -1
HDA1P53973 PMU1YKL128C 888 nt8.8□□□□□ -1
HDA1P53973 GLY1YEL046C 1164 nt8.79□□□□□ -1
HDA1P53973 DST1YGL043W 930 nt8.78□□□□□ -1
HDA1P53973 PNS1YOR161C 1620 nt8.78□□□□□ -1
HDA1P53973 ELP6YMR312W 822 nt8.77□□□□□ -1.01
HDA1P53973 ARG7YMR062C 1326 nt8.77□□□□□ -1.01
HDA1P53973 NDE2YDL085W 1638 nt8.76□□□□□ -1.01
HDA1P53973 WSC3YOL105C 1671 nt8.76□□□□□ -1.01
HDA1P53973 SNP1YIL061C 903 nt8.76□□□□□ -1.01
HDA1P53973 SPR1YOR190W 1338 nt8.76□□□□□ -1.01
HDA1P53973 TGL5YOR081C 2250 nt8.75□□□□□ -1.01
HDA1P53973 YDR476CYDR476C 675 nt8.75□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 57.2 ms