Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 YIR035CYIR035C 765 nt7.88□□□□□ -1.15
LSM5P40089 YBL095WYBL095W 813 nt7.88□□□□□ -1.15
LSM5P40089 LSP1YPL004C 1026 nt7.88□□□□□ -1.15
LSM5P40089 YIL177CYIL177C 5277 nt7.88□□□□□ -1.15
LSM5P40089 OCH1YGL038C 1443 nt7.87□□□□□ -1.15
LSM5P40089 MEX67YPL169C 1800 nt7.87□□□□□ -1.15
LSM5P40089 CAK1YFL029C 1107 nt7.87□□□□□ -1.15
LSM5P40089 EMC3YKL207W 762 nt7.87□□□□□ -1.15
LSM5P40089 YMR210WYMR210W 1350 nt7.86□□□□□ -1.15
LSM5P40089 PET18YCR020C 648 nt7.86□□□□□ -1.15
LSM5P40089 YER156CYER156C 1017 nt7.86□□□□□ -1.15
LSM5P40089 RNA170RNA170 169 nt7.86□□□□□ -1.15
LSM5P40089 PAU21YOR394W 495 nt7.86□□□□□ -1.15
LSM5P40089 PAU22YPL282C 495 nt7.86□□□□□ -1.15
LSM5P40089 UBP13YBL067C 2244 nt7.86□□□□□ -1.15
LSM5P40089 PDC6YGR087C 1692 nt7.86□□□□□ -1.15
LSM5P40089 BUD20YLR074C 501 nt7.84□□□□□ -1.15
LSM5P40089 ADE2YOR128C 1716 nt7.83□□□□□ -1.16
LSM5P40089 GRH1YDR517W 1119 nt7.83□□□□□ -1.16
LSM5P40089 YOR343CYOR343C 327 nt7.83□□□□□ -1.16
LSM5P40089 MIM1YOL026C 342 nt7.82□□□□□ -1.16
LSM5P40089 YJL045WYJL045W 1905 nt7.82□□□□□ -1.16
LSM5P40089 NPP2YEL016C 1482 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)BtD(GUC)B 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)DtD(GUC)D 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)G1tD(GUC)G1 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)G2tD(GUC)G2 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)I1tD(GUC)I1 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)I2tD(GUC)I2 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)J1tD(GUC)J1 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)J2tD(GUC)J2 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)J3tD(GUC)J3 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)J4tD(GUC)J4 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)KtD(GUC)K 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)L1tD(GUC)L1 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)L2tD(GUC)L2 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)MtD(GUC)M 72 nt7.81□□□□□ -1.16
LSM5P40089 tD(GUC)OtD(GUC)O 72 nt7.81□□□□□ -1.16
LSM5P40089 OLA1YBR025C 1185 nt7.81□□□□□ -1.16
LSM5P40089 MRS4YKR052C 915 nt7.8□□□□□ -1.16
LSM5P40089 BUB2YMR055C 921 nt7.8□□□□□ -1.16
LSM5P40089 YMC2YBR104W 990 nt7.8□□□□□ -1.16
LSM5P40089 YBR056WYBR056W 1506 nt7.79□□□□□ -1.16
LSM5P40089 MRP1YDR347W 966 nt7.79□□□□□ -1.16
LSM5P40089 HRA1HRA1 564 nt7.79□□□□□ -1.16
LSM5P40089 ADA2YDR448W 1305 nt7.78□□□□□ -1.16
LSM5P40089 MFT1YML062C 1179 nt7.77□□□□□ -1.17
LSM5P40089 HBS1YKR084C 1836 nt7.76□□□□□ -1.17
LSM5P40089 TPN1YGL186C 1740 nt7.76□□□□□ -1.17
LSM5P40089 BXI1YNL305C 894 nt7.76□□□□□ -1.17
LSM5P40089 RTG2YGL252C 1767 nt7.76□□□□□ -1.17
LSM5P40089 GDH1YOR375C 1365 nt7.75□□□□□ -1.17
LSM5P40089 RPL12BYDR418W 498 nt7.75□□□□□ -1.17
LSM5P40089 UTR5YEL035C 501 nt7.75□□□□□ -1.17
LSM5P40089 YJR149WYJR149W 1215 nt7.75□□□□□ -1.17
LSM5P40089 FET5YFL041W 1869 nt7.75□□□□□ -1.17
LSM5P40089 ATP2YJR121W 1536 nt7.74□□□□□ -1.17
LSM5P40089 RPS6AYPL090C 711 nt7.74□□□□□ -1.17
LSM5P40089 RPS6BYBR181C 711 nt7.74□□□□□ -1.17
LSM5P40089 YEL023CYEL023C 2049 nt7.74□□□□□ -1.17
LSM5P40089 YPR084WYPR084W 1371 nt7.73□□□□□ -1.17
LSM5P40089 MDL2YPL270W 2322 nt7.73□□□□□ -1.17
LSM5P40089 TAD2YJL035C 753 nt7.73□□□□□ -1.17
LSM5P40089 HDA1YNL021W 2121 nt7.73□□□□□ -1.17
LSM5P40089 AAT1YKL106W 1356 nt7.72□□□□□ -1.17
LSM5P40089 YJL009WYJL009W 327 nt7.72□□□□□ -1.17
LSM5P40089 YAL016C-AYAL016C-A 315 nt7.72□□□□□ -1.17
LSM5P40089 RHO1YPR165W 630 nt7.72□□□□□ -1.17
LSM5P40089 ELP4YPL101W 1371 nt7.71□□□□□ -1.17
LSM5P40089 snR86snR86 1004 nt7.71□□□□□ -1.18
LSM5P40089 PUP3YER094C 618 nt7.71□□□□□ -1.18
LSM5P40089 YLR072WYLR072W 2082 nt7.71□□□□□ -1.18
LSM5P40089 TOM71YHR117W 1920 nt7.7□□□□□ -1.18
LSM5P40089 MTO1YGL236C 2010 nt7.7□□□□□ -1.18
LSM5P40089 YPT31YER031C 672 nt7.7□□□□□ -1.18
LSM5P40089 MAM3YOL060C 2121 nt7.69□□□□□ -1.18
LSM5P40089 tL(UAA)B1tL(UAA)B1 84 nt7.68□□□□□ -1.18
LSM5P40089 tL(UAA)B2tL(UAA)B2 84 nt7.68□□□□□ -1.18
LSM5P40089 tL(UAA)DtL(UAA)D 84 nt7.68□□□□□ -1.18
LSM5P40089 SUP51tL(UAA)J 84 nt7.68□□□□□ -1.18
LSM5P40089 tL(UAA)KtL(UAA)K 84 nt7.68□□□□□ -1.18
LSM5P40089 tL(UAA)LtL(UAA)L 84 nt7.68□□□□□ -1.18
LSM5P40089 tL(UAA)NtL(UAA)N 84 nt7.68□□□□□ -1.18
LSM5P40089 YMR206WYMR206W 942 nt7.68□□□□□ -1.18
LSM5P40089 ORT1YOR130C 879 nt7.68□□□□□ -1.18
LSM5P40089 DUR3YHL016C 2208 nt7.67□□□□□ -1.18
LSM5P40089 YPL041CYPL041C 624 nt7.67□□□□□ -1.18
LSM5P40089 SHC1YER096W 1539 nt7.67□□□□□ -1.18
LSM5P40089 GCD11YER025W 1584 nt7.67□□□□□ -1.18
LSM5P40089 TDH1YJL052W 999 nt7.66□□□□□ -1.18
LSM5P40089 EHT1YBR177C 1356 nt7.66□□□□□ -1.18
LSM5P40089 TRP2YER090W 1524 nt7.66□□□□□ -1.18
LSM5P40089 EDC2YER035W 438 nt7.65□□□□□ -1.18
LSM5P40089 MEP1YGR121C 1479 nt7.65□□□□□ -1.18
LSM5P40089 PMU1YKL128C 888 nt7.65□□□□□ -1.18
LSM5P40089 LRO1YNR008W 1986 nt7.65□□□□□ -1.18
LSM5P40089 TIM50YPL063W 1431 nt7.65□□□□□ -1.18
LSM5P40089 THI6YPL214C 1623 nt7.64□□□□□ -1.19
LSM5P40089 THI73YLR004C 1572 nt7.64□□□□□ -1.19
LSM5P40089 ADE1YAR015W 921 nt7.64□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms