Protein–RNA interactions for Protein: P39682

PRP39, Pre-mRNA-processing factor 39, yeastyeast

Known RBP Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP39P39682 TPN1YGL186C 1740 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)BtD(GUC)B 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)DtD(GUC)D 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)G1tD(GUC)G1 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)G2tD(GUC)G2 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)I1tD(GUC)I1 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)I2tD(GUC)I2 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)J1tD(GUC)J1 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)J2tD(GUC)J2 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)J3tD(GUC)J3 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)J4tD(GUC)J4 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)KtD(GUC)K 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)L1tD(GUC)L1 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)L2tD(GUC)L2 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)MtD(GUC)M 72 nt7.5□□□□□ -1.21
PRP39P39682 tD(GUC)OtD(GUC)O 72 nt7.5□□□□□ -1.21
PRP39P39682 YJL009WYJL009W 327 nt7.5□□□□□ -1.21
PRP39P39682 YJR149WYJR149W 1215 nt7.5□□□□□ -1.21
PRP39P39682 BUD20YLR074C 501 nt7.5□□□□□ -1.21
PRP39P39682 MFT1YML062C 1179 nt7.5□□□□□ -1.21
PRP39P39682 AAC3YBR085W 924 nt7.5□□□□□ -1.21
PRP39P39682 GRH1YDR517W 1119 nt7.49□□□□□ -1.21
PRP39P39682 YJR154WYJR154W 1041 nt7.49□□□□□ -1.21
PRP39P39682 YRF1-3YGR296W 5580 nt7.49□□□□□ -1.21
PRP39P39682 YRF1-6YNL339C 5580 nt7.49□□□□□ -1.21
PRP39P39682 YRF1-7YPL283C 5580 nt7.49□□□□□ -1.21
PRP39P39682 YPR084WYPR084W 1371 nt7.48□□□□□ -1.21
PRP39P39682 BUB2YMR055C 921 nt7.48□□□□□ -1.21
PRP39P39682 YPT31YER031C 672 nt7.47□□□□□ -1.21
PRP39P39682 PDC6YGR087C 1692 nt7.47□□□□□ -1.21
PRP39P39682 RTG2YGL252C 1767 nt7.46□□□□□ -1.21
PRP39P39682 HRA1HRA1 564 nt7.46□□□□□ -1.22
PRP39P39682 NPP2YEL016C 1482 nt7.46□□□□□ -1.22
PRP39P39682 PET18YCR020C 648 nt7.45□□□□□ -1.22
PRP39P39682 YMR206WYMR206W 942 nt7.45□□□□□ -1.22
PRP39P39682 PAU21YOR394W 495 nt7.45□□□□□ -1.22
PRP39P39682 PAU22YPL282C 495 nt7.45□□□□□ -1.22
PRP39P39682 SNU66YOR308C 1764 nt7.45□□□□□ -1.22
PRP39P39682 YOR343CYOR343C 327 nt7.44□□□□□ -1.22
PRP39P39682 MRP1YDR347W 966 nt7.43□□□□□ -1.22
PRP39P39682 YER156CYER156C 1017 nt7.43□□□□□ -1.22
PRP39P39682 UFD1YGR048W 1086 nt7.43□□□□□ -1.22
PRP39P39682 ADE2YOR128C 1716 nt7.43□□□□□ -1.22
PRP39P39682 YIL177CYIL177C 5277 nt7.43□□□□□ -1.22
PRP39P39682 AAT1YKL106W 1356 nt7.43□□□□□ -1.22
PRP39P39682 RNA170RNA170 169 nt7.42□□□□□ -1.22
PRP39P39682 RHO1YPR165W 630 nt7.42□□□□□ -1.22
PRP39P39682 GDH1YOR375C 1365 nt7.41□□□□□ -1.22
PRP39P39682 HBS1YKR084C 1836 nt7.41□□□□□ -1.22
PRP39P39682 RPS6AYPL090C 711 nt7.4□□□□□ -1.22
PRP39P39682 RPS6BYBR181C 711 nt7.4□□□□□ -1.22
PRP39P39682 THI6YPL214C 1623 nt7.4□□□□□ -1.22
PRP39P39682 YBR056WYBR056W 1506 nt7.39□□□□□ -1.23
PRP39P39682 ADA2YDR448W 1305 nt7.39□□□□□ -1.23
PRP39P39682 BXI1YNL305C 894 nt7.39□□□□□ -1.23
PRP39P39682 THI73YLR004C 1572 nt7.38□□□□□ -1.23
PRP39P39682 ALR1YOL130W 2580 nt7.38□□□□□ -1.23
PRP39P39682 YAL016C-AYAL016C-A 315 nt7.38□□□□□ -1.23
PRP39P39682 FIT1YDR534C 1587 nt7.37□□□□□ -1.23
PRP39P39682 snR86snR86 1004 nt7.37□□□□□ -1.23
PRP39P39682 RPL12BYDR418W 498 nt7.37□□□□□ -1.23
PRP39P39682 UTR5YEL035C 501 nt7.37□□□□□ -1.23
PRP39P39682 TAD2YJL035C 753 nt7.37□□□□□ -1.23
PRP39P39682 PUP3YER094C 618 nt7.36□□□□□ -1.23
PRP39P39682 ORT1YOR130C 879 nt7.35□□□□□ -1.23
PRP39P39682 FET5YFL041W 1869 nt7.34□□□□□ -1.23
PRP39P39682 ELP4YPL101W 1371 nt7.34□□□□□ -1.23
PRP39P39682 GCD11YER025W 1584 nt7.34□□□□□ -1.23
PRP39P39682 TDH1YJL052W 999 nt7.34□□□□□ -1.23
PRP39P39682 PMU1YKL128C 888 nt7.34□□□□□ -1.23
PRP39P39682 MEP1YGR121C 1479 nt7.34□□□□□ -1.23
PRP39P39682 ATP2YJR121W 1536 nt7.33□□□□□ -1.24
PRP39P39682 PRE10YOR362C 867 nt7.32□□□□□ -1.24
PRP39P39682 YHL030W-AYHL030W-A 462 nt7.31□□□□□ -1.24
PRP39P39682 LPD1YFL018C 1500 nt7.31□□□□□ -1.24
PRP39P39682 DUR3YHL016C 2208 nt7.31□□□□□ -1.24
PRP39P39682 YGR137WYGR137W 375 nt7.3□□□□□ -1.24
PRP39P39682 RCF1YML030W 480 nt7.3□□□□□ -1.24
PRP39P39682 snR4snR4 186 nt7.3□□□□□ -1.24
PRP39P39682 TRP2YER090W 1524 nt7.29□□□□□ -1.24
PRP39P39682 tL(UAA)B1tL(UAA)B1 84 nt7.29□□□□□ -1.24
PRP39P39682 tL(UAA)B2tL(UAA)B2 84 nt7.29□□□□□ -1.24
PRP39P39682 tL(UAA)DtL(UAA)D 84 nt7.29□□□□□ -1.24
PRP39P39682 SUP51tL(UAA)J 84 nt7.29□□□□□ -1.24
PRP39P39682 tL(UAA)KtL(UAA)K 84 nt7.29□□□□□ -1.24
PRP39P39682 tL(UAA)LtL(UAA)L 84 nt7.29□□□□□ -1.24
PRP39P39682 tL(UAA)NtL(UAA)N 84 nt7.29□□□□□ -1.24
PRP39P39682 EHT1YBR177C 1356 nt7.29□□□□□ -1.24
PRP39P39682 TIM50YPL063W 1431 nt7.28□□□□□ -1.24
PRP39P39682 SHC1YER096W 1539 nt7.28□□□□□ -1.24
PRP39P39682 NDE2YDL085W 1638 nt7.28□□□□□ -1.24
PRP39P39682 YIL168WYIL168W 384 nt7.28□□□□□ -1.24
PRP39P39682 MAM3YOL060C 2121 nt7.28□□□□□ -1.24
PRP39P39682 ADE16YLR028C 1776 nt7.28□□□□□ -1.24
PRP39P39682 DUS3YLR401C 2007 nt7.27□□□□□ -1.25
PRP39P39682 LRO1YNR008W 1986 nt7.26□□□□□ -1.25
PRP39P39682 TOS1YBR162C 1368 nt7.26□□□□□ -1.25
PRP39P39682 JHD1YER051W 1479 nt7.25□□□□□ -1.25
PRP39P39682 ADE1YAR015W 921 nt7.25□□□□□ -1.25
PRP39P39682 INO1YJL153C 1602 nt7.25□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms